Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1377 693 0.0 seq1367 693 0.0 seq1394 524 2e-146 >seq1377 Length=314745 Score = 693 bits (768), Expect = 0.0 Identities = 478/537 (89%), Gaps = 5/537 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||| |||||| |||| | |||||||||||||||||||| Sbjct 4014 CTTTTGTTCTACGTGAGATTTCCGTTCTCACTGAGCTCACCTTAGGACACCTGCGTTATC 4073 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct 4074 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACACTGTCTTCAACTCGGATC 4133 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | || | | |||| | |||| | | || | | ||| |||||||| ||||| Sbjct 4134 AACCAGTTAATGGCTTTAATACTAGAAGTAAGACCGT-AGGCCCACTTCCGCTTGATTGA 4192 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || | |||||||||||||||| |||||| |||||||| || Sbjct 4193 ATAAGTAAAAAAACAATGCGAGTAGTGGTATTTCACTGTTGCCGAA---GCTCCCACCTA 4249 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||||| || ||| |||||||| ||| |||||||||||| ||||||||||||||| Sbjct 4250 TCCTACACCTCGCATGTCTTTTCACAATGTCAGACTAGAGTCAAACTCAACAGGGTCTTC 4309 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 4310 TTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 4369 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4370 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 4429 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4430 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 4489 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 4490 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA-TTTCTG 4545 Score = 693 bits (768), Expect = 0.0 Identities = 478/537 (89%), Gaps = 5/537 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||| |||||| |||| | |||||||||||||||||||| Sbjct 118860 CTTTTGTTCTACGTGAGATTTCCGTTCTCACTGAGCTCACCTTAGGACACCTGCGTTATC 118801 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct 118800 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACACTGTCTTCAACTCGGATC 118741 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | || | | |||| | |||| | | || | | ||| |||||||| ||||| Sbjct 118740 AACCAGTTAATGGCTTTAATACTAGAAGTAAGACCGT-AGGCCCACTTCCGCTTGATTGA 118682 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || | |||||||||||||||| |||||| |||||||| || Sbjct 118681 ATAAGTAAAAAAACAATGCGAGTAGTGGTATTTCACTGTTGCCGAA---GCTCCCACCTA 118625 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||||| || ||| |||||||| ||| |||||||||||| ||||||||||||||| Sbjct 118624 TCCTACACCTCGCATGTCTTTTCACAATGTCAGACTAGAGTCAAACTCAACAGGGTCTTC 118565 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 118564 TTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 118505 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118504 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 118445 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118444 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 118385 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 118384 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA-TTTCTG 118329 >seq1367 Length=51388 Score = 693 bits (768), Expect = 0.0 Identities = 478/537 (89%), Gaps = 5/537 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||| |||||| |||| | |||||||||||||||||||| Sbjct 409 CTTTTGTTCTACGTGAGATTTCCGTTCTCACTGAGCTCACCTTAGGACACCTGCGTTATC 468 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct 469 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACACTGTCTTCAACTCGGATC 528 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | || | | |||| | |||| | | || | | ||| |||||||| ||||| Sbjct 529 AACCAGTCAATGGCTTTAATACTAGAAGTAAGACCGT-AGGCCCACTTCCGCTTGATTGA 587 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || | |||||||||||||||| |||||| |||||||| || Sbjct 588 ATAAGTAAAAAAACAATGCGAGTAGTGGTATTTCACTGTTGCCGAA---GCTCCCACCTA 644 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||||| || ||| |||||||| ||| |||||||||||| ||||||||||||||| Sbjct 645 TCCTACACCTCGCATGTCTTTTCACAATGTCAGACTAGAGTCAAACTCAACAGGGTCTTC 704 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 705 TTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 764 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 765 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 824 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 825 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 884 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 885 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA-TTTCTG 940 >seq1394 Length=981283 Score = 524 bits (580), Expect = 2e-146 Identities = 382/440 (87%), Gaps = 5/440 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||| |||||| |||| | |||||||||||||||||||| Sbjct 17974 CTTTTGTTCTACGTGAGATTTCCGTTCTCACTGAGCTCACCTTAGGACACCTGCGTTATC 18033 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct 18034 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACACTGTCTTCAACTCGGATC 18093 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | || | | |||| | |||| | | || | | ||| |||||||| ||||| Sbjct 18094 AACCAGTTAATGGCTTTAATACTAGAAGTAAGACCGT-AGGCCCACTTCCGCTTGATTGA 18152 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || | |||||||||||||||| |||||| |||||||| || Sbjct 18153 ATAAGTAAAAAAACAATGCGAGTAGTGGTATTTCACTGTTGCCGAA---GCTCCCACCTA 18209 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||||| || ||| |||||||| ||| |||||||||||| ||||||||||||||| Sbjct 18210 TCCTACACCTCGCATGTCTTTTCACAATGTCAGACTAGAGTCAAACTCAACAGGGTCTTC 18269 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 18270 TTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 18329 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18330 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 18389 Query 427 TGGCTACCTTAAGAGAGTCA 446 |||||||| ||||||||||| Sbjct 18390 TGGCTACC-TAAGAGAGTCA 18408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635176878272