Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1394 113 7e-23 seq1383 113 7e-23 seq1377 113 7e-23 seq1296 113 7e-23 seq1083 113 7e-23 >seq1394 Length=981283 Score = 113 bits (124), Expect = 7e-23 Identities = 99/121 (82%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||| ||||| || ||| || || | Sbjct 17650 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGTATTTGCACTTGGTTGAAAAGCCAAT 17593 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||| ||||||||||| |||||||| |||||||||||||||||||||||| ||| | Sbjct 17592 GGTGCGAGGCTACCATCTGTCGGATTATGACTGAACGCCTCTAAGTCAGAATCCGTGCTA 17533 Query 121 G 121 | Sbjct 17532 G 17532 >seq1383 Length=478585 Score = 113 bits (124), Expect = 7e-23 Identities = 99/121 (82%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||| ||||| || ||| || || | Sbjct 32004 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGTATTTGCACTTGGTTGAAAAGCCAAT 32061 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||| ||||||||||| |||||||| |||||||||||||||||||||||| ||| | Sbjct 32062 GGTGCGAGGCTACCATCTGTCGGATTATGACTGAACGCCTCTAAGTCAGAATCCGTGCTA 32121 Query 121 G 121 | Sbjct 32122 G 32122 >seq1377 Length=314745 Score = 113 bits (124), Expect = 7e-23 Identities = 99/121 (82%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||| ||||| || ||| || || | Sbjct 134426 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGTATTTGCACTTGGTTGAAAAGCCAAT 134483 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||| ||||||||||| |||||||| |||||||||||||||||||||||| ||| | Sbjct 134484 GGTGCGAGGCTACCATCTGTCGGATTATGACTGAACGCCTCTAAGTCAGAATCCGTGCTA 134543 Query 121 G 121 | Sbjct 134544 G 134544 >seq1296 Length=13798 Score = 113 bits (124), Expect = 7e-23 Identities = 99/121 (82%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||| ||||| || ||| || || | Sbjct 260 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGTATTTGCACTTGGTTGAAAAGCCAAT 317 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||| ||||||||||| |||||||| |||||||||||||||||||||||| ||| | Sbjct 318 GGTGCGAGGCTACCATCTGTCGGATTATGACTGAACGCCTCTAAGTCAGAATCCGTGCTA 377 Query 121 G 121 | Sbjct 378 G 378 >seq1083 Length=6820 Score = 113 bits (124), Expect = 7e-23 Identities = 99/121 (82%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||| ||||| || ||| || || | Sbjct 6555 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGTATTTGCACTTGGTTGAAAAGCCAAT 6498 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||| ||||||||||| |||||||| |||||||||||||||||||||||| ||| | Sbjct 6497 GGTGCGAGGCTACCATCTGTCGGATTATGACTGAACGCCTCTAAGTCAGAATCCGTGCTA 6438 Query 121 G 121 | Sbjct 6437 G 6437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819188778496