Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq721 387 2e-105 seq572 257 3e-66 >seq721 Length=6814 Score = 387 bits (428), Expect = 2e-105 Identities = 244/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 6270 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 6211 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || |||||||| ||||| ||||||||||||||||| Sbjct 6210 TTAGTGGGTGAACAATCCAACAATTGGCGAATTCTACTTCGCAATGATAGGAAGAGCCGA 6151 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6150 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 6091 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||| ||| Sbjct 6090 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGAGAGG 6031 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 6030 CCACGCTTTCACGGTTTGTATTCA 6007 >seq572 Length=41908 Score = 257 bits (284), Expect = 3e-66 Identities = 216/265 (82%), Gaps = 9/265 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 13448 TCATCATTAGGGCAAAACTAACCTGTCTTACGACGGTCTAAACCCAGCTCACGTTCCCTT 13389 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||| |||||||| || || |||||||| |||| ||||||||||||||||| Sbjct 13388 TTAGTGGATGAACAATAAAAAAATTGGCGAATTCTACTTCACAATGATAGGAAGAGCCGA 13329 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 | |||||| ||||||||||||| |||||||| |||||||||||| |||| | ||||||| Sbjct 13328 CGTCGAAGAATCAAAAAGCAACATCGCTATGCACGCTTGGCTGCAACAATTCTGTTATCC 13269 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||| |||||| | ||||| | |||||| | | ||||||||||||| ||| Sbjct 13268 GTGT----ACTTTTTT-----AACTAGCTTAAAATTTTAAAGAACTAAAGGATCGAAAGG 13218 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 || | || ||| ||||||||||||| Sbjct 13217 CCTCGCTATCACGGTTTGTATTCAC 13193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854373838272