Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq721 515 1e-143 >seq721 Length=6814 Score = 515 bits (570), Expect = 1e-143 Identities = 427/513 (83%), Gaps = 19/513 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||| | |||| ||| ||||| | || |||||||||||||||||| Sbjct 1154 GTTCTCATTCCAATTGCCAGACTTGAAA-AGCCCGGCATTGTTATTTATTGTCACTACCT 1096 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1095 CCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1036 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||| ||||||||||||||||||| |||||||||||||||||||||||| | |||||||| Sbjct 1035 TCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAACGCCATGGTA 976 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||| |||| |||||||||||||| | | ||| ||||| | | Sbjct 975 GGCCCATATCCTACCATCCAAAGCTGATAGGGCAGAAACTCAATTGACTTATCGCTG--T 918 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGC-CCCGAAG-GGCGTT 297 || ||||| || ||||||||||| ||| || | | | |||||| || || Sbjct 917 GAA------GCGATCCGCACAGTTATTATGACTCAACACAATACCGACCGAAGTCGCATT 864 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCATGTATT 352 || ||| ||||||||||| | ||| ||||| ||| ||| ||| ||||||||| Sbjct 863 GG-TTTCAATCTAATAAATGCTACCCGTCCGACAAGCAGTTGGGTATTTACGCATGTATT 805 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||||| ||||||||||| ||||||||||||| |||| || || |||||||| Sbjct 804 AGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTGTCAAGTAGACTATAACTGA 745 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCT 471 | ||||||||||||||||||||||| ||| | | ||| |||||||||||||||||||||| Sbjct 744 TATAATGAGCCATTCGCAGTTTCACAGTACAAAGTTGTTTATACTTAGACATGCATGGCT 685 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||| ||||||||||||||| Sbjct 684 TAATCTTTGAGACAAGCGTATGACTACTGGCAG 652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510353751552