Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq400 190 2e-43 >seq400 Length=224259 Score = 190 bits (210), Expect = 2e-43 Identities = 608/936 (65%), Gaps = 8/936 (1%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 |||||||||| || |||| || ||||||||||| ||||| | |||||| || Sbjct 136561 ACAAACTTGGAGAGCGCAATGGACGCGAGGTTGCACACAGCGACCTCGTCCTTGCTCGTG 136502 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||| | |||| ||| || ||||||| || || || | ||||| || || Sbjct 136501 TACTCGATGACTTCGCAGCAAAGGTTACTGCTCTTGATCGTACCAAGGTTCTGCTGGTTC 136442 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 |||| |||||| || |||||||| | |||||| || ||||| ||||| | || || Sbjct 136441 GACTTGGAATTGCACGCGTCCTTGTAAAGCATGTAGGGCGTGCCAGTCTCGATCTGCGAA 136382 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCT---TCACCGTACGTACCGCCCTACCTTTG 66229 || | || || ||| || | |||| | ||| | || | || | ||| || Sbjct 136381 TCGAGCATCGCAAACCACAGCTGTTGGGCCTTGATGACCTTGCG-AGCG-CGACCCTCTG 136324 Query 66230 CGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289 | ||||| | |||| || |||||| | ||||| |||| |||| || Sbjct 136323 C-CTCGTACTTGGCGTACAGCGCTTCGAACTCGGCGCCCCAGCAGTCGGCGAGACCAGGG 136265 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349 | || || || | || ||| || || | || || || ||| || ||| Sbjct 136264 GCTTCGTTCGGGCAAAAGAGGCTCCACTCCCCGTTGGACTCGACGCGCTTCATGAACAGA 136205 Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409 || || ||||| | ||| |||||||| ||||| || || ||| || ||||||| || Sbjct 136204 TCGGGGATCCACATGGCATAGAAGAGGTCGCGCGCGCGGTGCAGTTCGTTGCCGTGGTTC 136145 Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469 || | ||| |||||||| || || || || ||||| || || ||||| ||||| || Sbjct 136144 TTCTTGAGGTCAAGGAACTCGAAAATATCCGCGTGCCACGGCTCAAGGTACATGGCAAAA 136085 Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529 |||||| | || || || || |||||||| ||||| || || || |||||| || || Sbjct 136084 GAGCCCTTCCGCTTACCACCGCCTTGGTCCACGTAACGCGCTGTATCGTTGAACACGCGA 136025 Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GC 66588 | ||| || | || |||||||| ||| || ||||| ||| | | | | || | Sbjct 136024 AGCATGGGAATGATACCGTTAGAGGAGCCGTTCGTGCC-ACGAATGTAGCTGTTGGTCGA 135966 Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648 || || | ||||| || | |||||| ||||||||| ||| || ||| || || | Sbjct 135965 ACGAATGTTGTGAATGTTGACACCAATGCCACCGGCCCACTTGGAAATGCAGGCGCACTG 135906 Query 66649 GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708 || || | | ||||| ||||| ||||| | |||| || ||| |||| || Sbjct 135905 CTTCAGCGTATCGTAAATGCCCTCAATTGAGTCGTCGCGCATGGCGAGAAGGAAGCACGA 135846 Query 66709 ACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA 66768 || || || || || |||| |||||| || || || |||||||| ||||| Sbjct 135845 CGAGAGCTGTGGACGAGGCGTACCGGCGTTGAAGAGAGTAGGCGTCGCGTGCGTGAAGTA 135786 Query 66769 ATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 || |||||| | |||||| | || | || ||||||| || || || || Sbjct 135785 CAACTGACTCATGTACTCGTACGTGTTGAGCGCCGCCTCAATGTCCTCCTTGTGGATACC 135726 Query 66829 GAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCAT 66888 || ||| ||||| | | | || || |||||| || | || |||| | ||| Sbjct 135725 GACAGCAACACGCATGATCATATGCTGCGGGCGTTCGCACACCTTGTCATTGACACGCAG 135666 Query 66889 TAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | ||| ||| || ||||||| |||||||| Sbjct 135665 AAGATAGCTCTTTTCGAGCGTCTTGAAGCCAAAGTA 135630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397553163507680