Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2346 100 1e-15 seq973 96.9 1e-14 seq1285 95.1 5e-14 >seq2346 Length=33220 Score = 100 bits (110), Expect = 1e-15 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 349082 ATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGG 349141 || |||||||| | |||| || || |||||||||||||||| || ||||| ||||| Sbjct 27187 ATTTCCTTGAGGCGTGGCACACCAAGCGTCACGTTCTTGGCCGACACACCGGCGTAGTGG 27246 Query 349142 AAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCT 349201 || || | ||| |||| ||||||| |||||| |||||| | || | || | || ||| Sbjct 27247 AACGTGTTGAGCGTCATCTGCGTGGCGGGCTCACCGATGGATTGCGCGGCCACGACGCCC 27306 Query 349202 ACCATCTCGCCGG 349214 |||||||||||| Sbjct 27307 GCCATCTCGCCGG 27319 >seq973 Length=135787 Score = 96.9 bits (106), Expect = 1e-14 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 21716 GATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTC 21775 ||||||||| |||||||| || || ||||| ||||| ||||| || |||||| | || Sbjct 109681 GATGCGTTCGAGGATGAGCTGCGCAATGCGGTCGCCGGCCTTGACTTGAAAGTCTTCGTT 109622 Query 21776 AGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGGC 21835 | ||||||||||| || || ||||| ||||| | |||| ||| | ||| || || Sbjct 109621 GGCGTGGTTGAAGATAACGACGCCGACATTGCCACGATAATCTTCGTCAATGACGCCAGC 109562 Query 21836 GCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAGTG 21895 ||||| || | ||||||| | | || ||||| | || || || || ||||| Sbjct 109561 ACCGACATCCAAGTGGTTCTTCCACGAGAGGCCCGAACGCGGGGCCACACGCGCGTAGCA 109502 Query 21896 GCCCTTTGGGATGGCCAT 21913 ||| | ||||| || || Sbjct 109501 GCCACTAGGGATCGCGAT 109484 >seq1285 Length=93073 Score = 95.1 bits (104), Expect = 5e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131 ||||| || ||||||||||| | |||| || || ||||||||| ||| |||||| || Sbjct 91137 GGCGTTGATGATCTCCTTGAGGCGCGGCACACCGAGTGTCACGTTCATGGACGCGACACC 91078 Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGC 349191 |||||||||||| |||| ||| |||| |||||| |||||| ||| |||| | | Sbjct 91077 GGCAAAGTGGAACGTCTTGAGCGTCATCTGCGTACCGGGCTCCGAAATGGACTGCGCGCC 91018 Query 349192 GAGGATGCCTACCATCTCGCCGGGC 349216 || | ||| || |||||| ||| Sbjct 91017 GATGGCGCCGACGGCCTCGCCCGGC 90993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084655416937476