Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq7569 233 4e-59 seq28 212 1e-52 seq2245 93.3 8e-17 seq86 75.2 2e-11 >seq7569 Length=545 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 388 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 329 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| |||||| | ||| || |||||||| Sbjct 328 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 270 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 269 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 210 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 209 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 151 Query 311 GTTAGGGG 318 ||| |||| Sbjct 150 GTTGGGGG 143 >seq28 Length=411 Score = 212 bits (234), Expect = 1e-52 Identities = 196/244 (80%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCAT 130 |||||| |||||||||||||||||| ||||||||| ||||||| |||||| | ||||| Sbjct 170 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACTTCAGCAT 229 Query 131 GGAATAATAGAATAGGACGTGCG-GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||| ||| | | | |||||||||||||||| | ||| ||||||| Sbjct 230 GGAATAATAAGATACGACCTTGGTGGTCTATTTTGTTGGTTTGCAC-ACCAGGGTAATGA 288 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||| ||| |||||| | |||| | |||||||||||||||||||||| Sbjct 289 TTAATAGGGACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGATCGT 348 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | |||| | || |||||||| || ||||||||||||||||||||||| ||||||| Sbjct 349 TGAAAGATGAGCTTAGGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAA 407 Query 310 AGTT 313 |||| Sbjct 408 AGTT 411 >seq2245 Length=13263 Score = 93.3 bits (102), Expect = 8e-17 Identities = 91/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 || ||| |||||| | |||| | |||||||||||||||||||||| | |||| Sbjct 270 GACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGATCGTTGAAAGAT 329 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 | || |||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct 330 GAGCTTAGGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 384 Score = 80.6 bits (88), Expect = 5e-13 Identities = 73/91 (80%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||||| | | | ||||||||||||||||| ||| |||||| | Sbjct 630 TCTATTTTGTTGGTTTGCACTCCAGG-GTAATGATTAATAGGGACAGTTGGGGGTATTCA 572 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 |||| | |||||||||||||||||||||| Sbjct 571 TATTTCAACGTCAGAGGTGAAATTCTTGGAT 541 >seq86 Length=199 Score = 75.2 bits (82), Expect = 2e-11 Identities = 49/53 (92%), Gaps = 1/53 (2%) Strand=Plus/Plus Query 266 GCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct 4 GCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915098110784