Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2993 423 5e-116 seq92 75.2 3e-11 >seq2993 Length=1160 Score = 423 bits (468), Expect = 5e-116 Identities = 335/401 (84%), Gaps = 1/401 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 1077 AGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTT 1018 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||||||||||||||||||||| ||| ||| |||| |||| | |||||||||| Sbjct 1017 AATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTTGTTAAGTTGGATGTGAAATCC 958 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 ||||||| |||||||||| |||||| |||| ||||||||| || |||||| ||| Sbjct 957 CCGGGCTCAACCTGGGAACTGCATTCAAAACTGACTGACTAGAGTATGGTAGAGGGTGGT 898 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||||||| ||||||||||||||||| | |||||||||| |||||||||| Sbjct 897 GGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGCGAAGGC 838 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || ||||| | | |||||| || | | ||||||||||||||||||||||||||||| Sbjct 837 GACCACCTGGACTGATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGA 778 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTTACTTCCTTG 368 ||||||||||||||||||| |||||||| |||||||| |||||| | || ||| Sbjct 777 TACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGAGCCTTGAGCTCTTA 718 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || ||||||||| | |||||||||||||||||| ||| Sbjct 717 GTGGCGCAGCTAACGCATTAAGTTGACCGCCTGGGGAGTAC 677 >seq92 Length=2558 Score = 75.2 bits (82), Expect = 3e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 229 AGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCG 288 ||||| | ||| ||||| ||| ||||| | |||||| || | |||||||| Sbjct 202 AGGAATATCAAAAGCGAAAGCAATTATCTGGGTATATACTGACACTGAGAAACGAAAGCT 143 Query 289 TGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||| ||| ||| ||||||||||||| ||||||||| || |||||||| Sbjct 142 TGGGTAGCGAACGGGATTAGATACCCCGGTAGTCCATGCTGTAAACGAT 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289456428832