Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq4362 86.0 7e-15 seq44 75.2 1e-11 >seq4362 Length=972 Score = 86.0 bits (94), Expect = 7e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || || |||| || |||| |||||||||||| ||| ||| ||| Sbjct 433 CAAACCGACACAGGTGGTTGGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 492 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| || | | |||||||||||| || Sbjct 493 GAACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 527 >seq44 Length=490 Score = 75.2 bits (82), Expect = 1e-11 Identities = 120/172 (70%), Gaps = 3/172 (2%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| |||| || ||||| ||||||| | | || ||| | | |||| Sbjct 24 AAACCGACACAGGTAGATAAGTCGAATAGACTAAGGTGTATAAGAGAACTATTTTGAAGG 83 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 |||| |||||| |||| |||||||||||||| |||| || ||| | || ||| Sbjct 84 AACTCGGCAAAATGACTCTGTAACTTCGGGAGAAAGAGTACCTTTTTAACAA---AAGGT 140 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || | ||| | || ||||||||| ||||||||||| || ||| || Sbjct 141 GTCACAAAATTGAGGGTTGCGACTGTTTAATAAAAACACAGGACTCTGCTAA 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531142709582