Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq4362 242 4e-62 seq44 89.7 5e-16 >seq4362 Length=972 Score = 242 bits (268), Expect = 4e-62 Identities = 137/139 (99%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 20 GAGGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTAT 79 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 545 GAAGGACTTGCTCCGTAAGCCCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTAT 604 Query 80 TAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGT 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 605 TAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGT 664 Query 140 GCCGGAAGGTTAATTGATG 158 ||||||||||||||||||| Sbjct 665 GCCGGAAGGTTAATTGATG 683 >seq44 Length=490 Score = 89.7 bits (98), Expect = 5e-16 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||||||| ||||||| || | || || ||||||||| || Sbjct 158 TGCGACTGTTTAATAAAAACACAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 217 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAAT 153 || |||||||||||| ||||| ||||| Sbjct 218 ACACCTGCCCGGTGCTGGAAGATTAAT 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476748576673