Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06]
11,133 sequences; 32,990,475 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq44 277 4e-72
seq4362 268 2e-69
seq2797 163 6e-38
>seq44
Length=490
Score = 277 bits (306), Expect = 4e-72
Identities = 279/360 (78%), Gaps = 11/360 (3%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | ||| ||| ||||| |||||||| | |||||||| | |||||
Sbjct 417 GCATCTTCACGGATATTTCAAATTCACTAAGTCTATTTTGGAGACAGTAGGGATGTCGTT 358
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
|| || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 357 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 298
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA-ACAGATC 185
|||||| |||||||||||||||| ||| || || ||| || ||| |||
Sbjct 297 GAGTTACAGCCGCCGTTTACTGGGACTT-------CTATTT--TATGCAATATACATATC 247
Query 186 CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245
| |||| |||||||||||||||||| ||||| |||||||||| | || | | ||||||
Sbjct 246 CTATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCA 187
Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG-CGGCCTGTCATAGAC 304
|| ||||||||||| ||||||||||| | ||| | || | | | | || |
Sbjct 186 GAGTCCTGTGTTTTTATTAAACAGTCGCAACCCTCAATTTTGTGACACCTTTTGTTAAAA 127
Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364
||| || | ||||||| ||||||| | |||||||||||||||||||| | ||||||||||
Sbjct 126 AGGTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTTCAAAATAGTTCTC 67
>seq4362
Length=972
Score = 268 bits (296), Expect = 2e-69
Identities = 290/390 (74%), Gaps = 27/390 (7%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | |||| ||||||||| |||||| || ||||||| |||
Sbjct 865 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 806
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 805 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 746
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
|||||||||||||||||||||||||| ||||||| | | |||||| | |||||
Sbjct 745 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 686
Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240
| |||||||||| ||||||||||||||||| ||||||| || ||| || |
Sbjct 685 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 626
Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300
| ||||| |||||||||| ||||||||||| ||||| | ||| || || | |||
Sbjct 625 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC-GGCAT 567
Query 301 AG--------------------------ACAGGCACCCCTTCTCCCTAAGTTACGGGGTC 334
| || ||| | ||||||||| ||||||||| | |
Sbjct 566 GGGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCC 507
Query 335 ATTTTGCCGAGTTCCTTAACAATAGTTCTC 364
|||||||| |||||||| || |||||||
Sbjct 506 ATTTTGCCTAGTTCCTTCACCCGAGTTCTC 477
>seq2797
Length=16102
Score = 163 bits (180), Expect = 6e-38
Identities = 125/148 (84%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | ||| ||| ||||| |||||||| | |||||||| | |||||
Sbjct 5914 GCATCTTCACGGATATTTCAAATTCACTAAGTCTATTTTGGAGACAGTAGGGATGTCGTT 5855
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
|| || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 5854 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 5795
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154
|||||| |||||||||||||||| |||
Sbjct 5794 GAGTTACAGCCGCCGTTTACTGGGACTT 5767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062281723008
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