Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq2993 542 9e-152 seq202 293 7e-77 >seq2993 Length=1160 Score = 542 bits (600), Expect = 9e-152 Identities = 422/498 (85%), Gaps = 4/498 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 679 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 620 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||||||||||||||||||||||||| |||||||||| ||| | || Sbjct 619 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGCCTTGACATCCAATGAACTTTC 560 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||||||| | | || |||||| ||| | |||||||| ||||||| ||||||||| Sbjct 559 TAGAGATAGATGGGTGCC-TTCGGGA-ACATTGAGACAGGTGCTGCATGGCTGTCGTCAG 502 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | Sbjct 501 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCTTAGTTAC 442 Query 241 CATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 || || ||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 441 CAGCACGTAATGGTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 382 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| |||||||| |||||| | |||||||||||||||||||||||| | | Sbjct 381 ATGACGTCAAGTCATCATGGCCCTTACGGCCTGGGCTACACACGTGCTACAATGGTCGGT 322 Query 359 ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGAT 418 ||| |||| || || ||||||||| ||| ||||||| ||| | || ||| ||||| Sbjct 321 ACAGAGGGTTGCCAAGCCGCGAGGTGGAGCTAATCCCAGAAAACCGATCGTAGTCCGGAT 262 Query 419 TGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCT 478 | |||||||||||||||| ||||| ||||||||||||||||| ||||| ||| Sbjct 261 CGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGAATCAGAATGTC 202 Query 479 ACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 201 GCGGTGAATACGTTCCCG 184 >seq202 Length=498 Score = 293 bits (324), Expect = 7e-77 Identities = 365/496 (74%), Gaps = 37/496 (7%) Strand=Plus/Plus Query 10 AAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAA 69 |||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 1 AAGGTTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTTTAA 60 Query 70 TTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAG 129 ||||| ||||| ||||||||||||| |||||| | | ||| | | | ||| Sbjct 61 TTCGATAATACGCGCAGAACCTTACCAACTCTTGAAAA--TTTGA----TTAAAAAATAA 114 Query 130 AGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCG 189 || || | | ||||||| ||||||| ||||||||| ||||| | Sbjct 115 ----TT----TTAGTTTAA-------ACAGGTGTTGCATGGCTGTCGTCAGTCCGTGTTG 159 Query 190 TGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAA 249 ||| ||||| |||||| ||| |||| |||||||| || |||||||||| | |||| Sbjct 160 TGAAATGTTTGGTTAATTCCTTTAACGGACGCAACCCCTATTATTAGTTGCCA-CTTTAA 218 Query 250 GTTGG---------GCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || ||||||||| |||| | ||| ||| | |||||| |||||| Sbjct 219 TTTAAAATATAAAAGCACTCTAATAAAACTGTCAATGATAAATTGAAGGAAG-TGGGGAT 277 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 || ||||| || ||||| ||||||||| ||||||||||||||||||||||||| | ||| Sbjct 278 GAGGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATGGTAATTAC 337 Query 361 AAAGGGCAGCGAAACCG----CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 || | | || | | | | | |||||||| |||||| ||| ||||||| Sbjct 338 AATGAGACGCAATAATGTTTTTAAATTGGAGCAAATCTTTAAAAGTT-ATCTTAGTTCGG 396 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATG 476 ||| ||| ||| |||||| ||||||||||||||||||||||||||||| ||| ||||||| Sbjct 397 ATTATAGGCTGAAACTCGCCTATATGAAGCTGGAATCGCTAGTAATCGCAGAACAGCATG 456 Query 477 CTACGGTGAATACGTT 492 || ||||||||| ||| Sbjct 457 CTGCGGTGAATATGTT 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503832559680