Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3953 199 6e-49 seq364 181 2e-43 seq85 176 7e-42 seq882 89.7 8e-16 seq2478 87.8 3e-15 seq40 87.8 3e-15 >seq3953 Length=182 Score = 199 bits (220), Expect = 6e-49 Identities = 155/182 (85%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 26 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTT 60 Query 86 TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAA-CCAT-AGTCGATGGGGCT 143 | || | | | ||||||||||||||||||| ||| || || || | | ||| Sbjct 61 GGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCCGTGAAGGGATGCCTCCACGTAGCT 120 Query 144 ATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAAC 203 | |||||||| | ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 121 AGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAAC 180 Query 204 TA 205 || Sbjct 181 TA 182 >seq364 Length=184 Score = 181 bits (200), Expect = 2e-43 Identities = 154/185 (83%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 26 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT 85 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 1 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCCTT 60 Query 86 TGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCAGCCACCAACCATAGTCGATGGG-- 140 ||| | || | |||| ||||||||||||||| | ||| || | | | | | | Sbjct 61 TGGTTTGATTACCCAAAAGTCCCTCTAAGAAGTCTCAAAACCTACAAAAATGTAAGCGAA 120 Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 |||||||| | | ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 121 ACTATTTAG-ATGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACC 179 Query 201 AACTA 205 ||||| Sbjct 180 AACTA 184 >seq85 Length=256 Score = 176 bits (194), Expect = 7e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 AGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 61 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 62 GCACCACCACCCATAGAATCAAGAAAGAGCTCTCAATCTGTC 103 >seq882 Length=547 Score = 89.7 bits (98), Expect = 8e-16 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 545 Query 62 CC 63 || Sbjct 546 CC 547 >seq2478 Length=6100 Score = 87.8 bits (96), Expect = 3e-15 Identities = 83/105 (79%), Gaps = 7/105 (7%) Strand=Plus/Minus Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGG------CATCACAGACCTGTTATTG 71 |||||| |||||||||||||||||||||||||||| || |||||| |||| ||| Sbjct 3194 AGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGTATATATATTACAGACGTGTTGTTG 3135 Query 72 CCTCAAACTTCCATTG-GCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| ||||||| ||| || | ||| ||||||||||||||| Sbjct 3134 CCTACAACTTCCTTTGTTATGATAAACAAAAGTCCCTCTAAGAAG 3090 >seq40 Length=507 Score = 87.8 bits (96), Expect = 3e-15 Identities = 48/48 (100%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 63 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 460 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796714064373