Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq7465 260 2e-67 seq115 251 1e-64 seq537 109 9e-22 seq2440 102 1e-19 seq316 87.8 3e-15 seq8069 78.8 2e-12 >seq7465 Length=167 Score = 260 bits (288), Expect = 2e-67 Identities = 158/167 (95%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1 TAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAA 60 Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 61 CAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATC 120 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 167 >seq115 Length=167 Score = 251 bits (278), Expect = 1e-64 Identities = 156/167 (93%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 60 Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 ||||||||| || ||| |||| ||||| ||||||||||||||||||||||||| ||| Sbjct 61 CAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGACATCGAAGAATC 120 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 121 AAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATC 167 >seq537 Length=20103 Score = 109 bits (120), Expect = 9e-22 Identities = 62/63 (98%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 6956 AAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 6897 Query 225 CTG 227 ||| Sbjct 6896 CTG 6894 >seq2440 Length=456 Score = 102 bits (112), Expect = 1e-19 Identities = 72/81 (89%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | || ||| ||||||||||||||||||||||||||||| Sbjct 377 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 435 Query 61 TGACGGTCTAAACCCAGCTCA 81 |||||||||||||||||||| Sbjct 436 CGACGGTCTAAACCCAGCTCA 456 >seq316 Length=579 Score = 87.8 bits (96), Expect = 3e-15 Identities = 50/51 (98%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCA 81 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 529 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCA 579 >seq8069 Length=772 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| || ||||| | || Sbjct 452 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACC 393 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| |||| ||| || | | ||| || ||||||||||||| | |||| | | Sbjct 392 CTTGGGACCGGCTTCAGCCCCAGGATGT---GATGAGCCGACATCGAGGTGCCAAACACC 336 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||||| ||||| | | |||| |||||||| | ||| ||||| Sbjct 335 GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTT 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854304879648