Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq92 123 5e-26 seq8043 105 1e-20 >seq92 Length=2558 Score = 123 bits (136), Expect = 5e-26 Identities = 148/196 (76%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| ||| || |||| |||||||| |||||||| |||||||||| ||||| Sbjct 475 CCTTCTT-CACTCACTTGGTATTG-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCT 532 Query 77 CACTGCTGCCTCCCGT-AGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCC 135 ||||||||||| | | ||| ||| |||| ||||||| ||| |||| |||||| | | Sbjct 533 CACTGCTGCCTTTTTTAAAAAGTTTGGGCCGTTTCTCAGTCCCAATGTGGCTGATCGTTC 592 Query 136 TCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG-CCATTACCTCACCAACTAGCTAATC 194 | ||| ||||| || ||| | | |||||| || | |||| |||||||| |||||| Sbjct 593 TTTCAAACCAGCTAAAGATTGCAGGCTTGGTAAGTCTATTAAACTACCAACTACCTAATC 652 Query 195 CGACCTAGGCTCATCT 210 || | ||||||| Sbjct 653 TTACGCAAACTCATCT 668 >seq8043 Length=2724 Score = 105 bits (116), Expect = 1e-20 Identities = 118/154 (77%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| || ||| || |||| |||||||| |||||||| |||||||||| ||||| Sbjct 1374 CCTTCTT-CAGTCACTTGGTATTG-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCT 1431 Query 77 CACTGCTGCCTCCCGT-AGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCC 135 ||||||||||| | | ||| ||| |||| ||||||| ||| |||| |||||| | | Sbjct 1432 CACTGCTGCCTTTTTTAAAAAGTTTGGGCCGTTTCTCAGTCCCAATGTGGCTGATCGTTC 1491 Query 136 TCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG 169 | ||| ||||| || || || | |||||| || Sbjct 1492 TTTCAAACCAGCTAAAGACTGTAGGCTTGGTAAG 1525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071880654240