Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2993 196 4e-48 seq202 93.3 4e-17 seq1441 75.2 9e-12 >seq2993 Length=1160 Score = 196 bits (216), Expect = 4e-48 Identities = 140/161 (87%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||| Sbjct 245 TCGAGTTGCAGACTGCGATCCGGACTACGATCGGTTTTCTGGGATTAGCTCCACCTCGCG 304 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | ||||| ||||||||| ||||||||| ||||||| ||||| || ||||||||| Sbjct 305 GCTTGGCAACCCTCTGTACCGACCATTGTAGCACGTGTGTAGCCCAGGCCGTAAGGGCCA 364 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||||||||||||||||||| Sbjct 365 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 405 >seq202 Length=498 Score = 93.3 bits (102), Expect = 4e-17 Identities = 120/163 (74%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCG--- 58 |||||| ||| ||| |||||| |||| |||| ||||| |||| ||||| | Sbjct 414 CGAGTTTCAGCCTATAATCCGAACTAAGATA-ACTTTTAAAGATTTGCTCCAATTTAAAA 356 Query 59 -CGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGG 117 | | ||| | | |||| |||||||||| ||||||| ||||| || |||||||| Sbjct 355 ACATTATTGCGTCTCATTGTAATTACCATTGTAGCACGTGTGTAGCCCAACTCATAAGGG 296 Query 118 CCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160 |||||| |||||||| ||||||||| |||||| | ||| ||| Sbjct 295 CCATGAAGACTTGACCTCATCCCCA-CTTCCTTCAATTTATCA 254 >seq1441 Length=4621 Score = 75.2 bits (82), Expect = 9e-12 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 93 ACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||||||| ||||| || |||||||||||||| |||||||| ||||||||| |||||| | Sbjct 2545 ACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACCTCATCCCCA-CTTCCTTCA 2603 Query 153 GTTTGTCA 160 ||| ||| Sbjct 2604 ATTTATCA 2611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415955134010