Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06]
11,133 sequences; 32,990,475 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq8069 271 1e-70
seq38 141 1e-31
>seq8069
Length=772
Score = 271 bits (300), Expect = 1e-70
Identities = 216/260 (83%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75
|||||||||| |||||| ||||| |||| ||| ||||| ||| || |||| ||||
Sbjct 609 GCTTAGATGCTTTCAGCGGTTATCTATTCCGAACATAGCTACCCGGCAATGCCACTGGCG 550
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
||||| || ||||||||||| ||||| ||||||||||||||||| | |||| |||
Sbjct 549 TGACAACCGGAACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCT 490
Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195
||||||| || ||| ||||| | |||||||||||||||||||| ||||||||| |||||
Sbjct 489 CTCAAATCTCAAACGTCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCC 430
Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255
||||||||| || |||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct 429 AGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTTCAGCCCCAG 370
Query 256 GATGAGACGAGCCGACATCG 275
|||| || ||||||||||||
Sbjct 369 GATGTGATGAGCCGACATCG 350
>seq38
Length=2574
Score = 141 bits (156), Expect = 1e-31
Identities = 190/263 (72%), Gaps = 5/263 (2%)
Strand=Plus/Minus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76
|||| |||| ||||| |||||| | ||| |||||| | | ||||||| | |
Sbjct 691 CTTATATGCTTTCAGTAATTATCCTATATAAATTTAGCTACTCGGCTATGCTTTAAAAAA 632
Query 77 T----ACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCT 132
||||| | | |||||||| ||| || | || ||||||||||||| || |
Sbjct 631 ATTAAACAACCGATACACCAGAGATTTACCCTTTTCGATCCTCTCGTACTAGAATTAGAT 572
Query 133 CCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAA 192
| ||| |||| | || | ||||| ||| ||||||||| ||||||||| ||
Sbjct 571 TTTTTCATTTTTCGTTTTTTGTAGAAG-ATAGGAACCAAACTGTCTCACGACGTTCTAAA 513
Query 193 CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCC 252
|||| ||| ||| || ||||||| ||||||||||| ||||||||| |||| ||||||| |
Sbjct 512 CCCAACTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGAACCTTCTTCAGCTC 453
Query 253 CAGGATGAGACGAGCCGACATCG 275
||||||| || ||| ||||||||
Sbjct 452 CAGGATGTGATGAGTCGACATCG 430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780715789988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |