Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq8069 271 1e-70 seq38 141 1e-31 >seq8069 Length=772 Score = 271 bits (300), Expect = 1e-70 Identities = 216/260 (83%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| |||| ||| ||||| ||| || |||| |||| Sbjct 609 GCTTAGATGCTTTCAGCGGTTATCTATTCCGAACATAGCTACCCGGCAATGCCACTGGCG 550 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| || ||||||||||| ||||| ||||||||||||||||| | |||| ||| Sbjct 549 TGACAACCGGAACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCT 490 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||||| || ||| ||||| | |||||||||||||||||||| ||||||||| ||||| Sbjct 489 CTCAAATCTCAAACGTCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCC 430 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||||||| || |||||| ||||||||||| |||||||||||| |||||||||||| Sbjct 429 AGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTTCAGCCCCAG 370 Query 256 GATGAGACGAGCCGACATCG 275 |||| || |||||||||||| Sbjct 369 GATGTGATGAGCCGACATCG 350 >seq38 Length=2574 Score = 141 bits (156), Expect = 1e-31 Identities = 190/263 (72%), Gaps = 5/263 (2%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76 |||| |||| ||||| |||||| | ||| |||||| | | ||||||| | | Sbjct 691 CTTATATGCTTTCAGTAATTATCCTATATAAATTTAGCTACTCGGCTATGCTTTAAAAAA 632 Query 77 T----ACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCT 132 ||||| | | |||||||| ||| || | || ||||||||||||| || | Sbjct 631 ATTAAACAACCGATACACCAGAGATTTACCCTTTTCGATCCTCTCGTACTAGAATTAGAT 572 Query 133 CCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAA 192 | ||| |||| | || | ||||| ||| ||||||||| ||||||||| || Sbjct 571 TTTTTCATTTTTCGTTTTTTGTAGAAG-ATAGGAACCAAACTGTCTCACGACGTTCTAAA 513 Query 193 CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCC 252 |||| ||| ||| || ||||||| ||||||||||| ||||||||| |||| ||||||| | Sbjct 512 CCCAACTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGAACCTTCTTCAGCTC 453 Query 253 CAGGATGAGACGAGCCGACATCG 275 ||||||| || ||| |||||||| Sbjct 452 CAGGATGTGATGAGTCGACATCG 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780715789988