Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq2993 372 7e-101 seq92 136 1e-29 >seq2993 Length=1160 Score = 372 bits (412), Expect = 7e-101 Identities = 321/396 (81%), Gaps = 1/396 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||| |||| || ||||||| || Sbjct 1072 AAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCG 1013 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| | ||||||||||||| |||||| || |||||| | || Sbjct 1012 GAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTTGTTAAGTTGGATGTGAAATCCCCGGG 953 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| || ||||| || |||||| | ||||||| | || || ||||||| Sbjct 952 CTCAACCTGGGAACTGCATTCAAAACTGACTGACTAGAGTATGGTAGAGGGTGGTGGAAT 893 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||||||||||||||||||||||||| | |||||||||||||||||||||| | Sbjct 892 TTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGCGAAGGCGACCA 833 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 832 CCTGGACTGATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 773 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 |||||||||||||||||||||||| ||||| || ||| | | || || ||| Sbjct 772 TGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGAGCCTTGAGCTCT-TAGTGG 714 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| |||||| ||||| || ||||||||||| Sbjct 713 CGCAGCTAACGCATTAAGTTGACCGCCTGGGGAGTA 678 >seq92 Length=2558 Score = 136 bits (150), Expect = 1e-29 Identities = 242/347 (70%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGG 58 ||||| | || |||| | |||||| ||| |||||||||| |||||||||||| | Sbjct 430 TACTTAAAGAAGAAGTTCTGGCTAA-TACCCGTGCCAGCAGTCGCGGTAATACGGGAAGA 372 Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || ||| |||| | ||| | | |||||||||||| |||||| |||| |||||| | Sbjct 371 GCGAGCATTATTCAAAATGATTAGGCGTAAAGGGTTTGTAGGTTGTTTTTTAAGTTGAAA 312 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGG- 177 ||| || ||||||| || ||| ||||| | ||||||| | Sbjct 311 AGAAAATAATAAAGCTCAACTTTATCTCTTTTTTCAAAACTAAAAAACTAGAGTATACAT 252 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || | | ||||| || || || | | |||| | |||| ||| ||||| | || Sbjct 251 AGAGGATAATAGAATTTTTATTGGAGGGATAAAATCTATTGATAATAGAAGGAATATCAA 192 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 ||||| || | |||| | || |||||||||||| ||||||| |||| ||| | Sbjct 191 AAGCGAAAGCAATTATCTGGG-TATATACTGACACTGAGAAACGAAAGCTTGGGTAGCGA 133 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343 || ||||||||||||| ||||||||| || ||||||||||| | ||| Sbjct 132 ACGGGATTAGATACCCCGGTAGTCCATGCTGTAAACGATGAGTGCTA 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203066047744