Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq882 257 3e-66 seq40 214 3e-53 seq3953 132 9e-29 seq364 120 6e-25 seq2478 80.6 5e-13 >seq882 Length=547 Score = 257 bits (284), Expect = 3e-66 Identities = 182/206 (88%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 123 GGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGA 182 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 547 GGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGA 488 Query 183 GTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATA 242 ||||| ||||||||||| ||| | |||||||||| | ||| | ||||| |||||||| Sbjct 487 GTTCA-CACCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATA 430 Query 243 GAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACG 302 || |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| || Sbjct 429 GATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCG 370 Query 303 CGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| ||||||||||||||||||| Sbjct 369 CGTTGACTACGTCCCTGCCCTTTGTA 344 >seq40 Length=507 Score = 214 bits (236), Expect = 3e-53 Identities = 171/206 (83%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 123 GGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGA 182 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 507 GGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGA 448 Query 183 GTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATA 242 ||| | |||||| ||| |||||||||||||||||| || ||||||| |||||| Sbjct 447 GTTTAAAACCTTGACCGATAGGTCTGGGTAATCTTGTAAATGCGCATCGTGCTAGGGATA 388 Query 243 GAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACG 302 || |||||||| | |||| |||||||||| |||||||| || ||||||||| | Sbjct 387 GATTGTTGCAATTTTCAATCTTGAACGAGGAATTCCTAGTAAATGCAAGTCATCAGCTTG 328 Query 303 CGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||||| Sbjct 327 CGTTGATTACGTCCCTGCCCTTTGTA 302 >seq3953 Length=182 Score = 132 bits (146), Expect = 9e-29 Identities = 119/148 (80%), Gaps = 11/148 (7%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73 || |||||||| | |||||||| |||| | ||| | || ||| |||||| Sbjct 144 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 89 Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||||||| | | | || | | |||||||||||||||||||||||||||||| Sbjct 88 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 29 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGC 160 |||||||||||||||||||||||||||| Sbjct 28 GCCCTTAGATGTTCTGGGCCGCACGCGC 1 >seq364 Length=184 Score = 120 bits (132), Expect = 6e-25 Identities = 82/92 (89%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||||||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 92 CTTCTTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 33 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGC 160 |||||||||||||||||||||||||||||||| Sbjct 32 TGATGCCCTTAGATGTTCTGGGCCGCACGCGC 1 >seq2478 Length=6100 Score = 80.6 bits (88), Expect = 5e-13 Identities = 81/105 (77%), Gaps = 8/105 (8%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT--CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||| | | | || | | ||||||| |||||| |||| |||||| Sbjct 3090 CTTCTTAGAGGGACTTTTGTTTATCATAACAAAGGAAGTTGTAGGCAACAACACGTCTGT 3149 Query 130 GATG------CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 || |||||||||||||||||||||||||||| |||||| Sbjct 3150 AATATATATACCCTTAGATGTTCTGGGCCGCACGCGCGTTACACT 3194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947094548224