Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq4035 379 7e-103 seq409 104 8e-20 >seq4035 Length=986 Score = 379 bits (420), Expect = 7e-103 Identities = 378/483 (78%), Gaps = 9/483 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||||||||| ||||||||||||| | |||||| |||| Sbjct 537 CGAGTCTTAATAGGGCGTCTAGTCGCTGGGAATAGACCCGAAACCGGGCGATCTATCCAT 478 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||||| ||||||| ||||||| |||| |||||||| | Sbjct 477 GGGCAGGTTGAAGGTTGGGTAACACTAACTGGAGGACCGAACCGACTACCGTTGAAAAGT 418 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||| |||||| |||||| | || |||||||||||| ||| || ||| ||||||||||||| Sbjct 417 TAGCGGATGACCTGTGGATCGGAGTGAAAGGCTAATCAAGCTCGGAGATAGCTGGTTCTC 358 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 ||||| |||||||||||| |||||| ||||||| | ||||||||||||||||| || Sbjct 357 CTCGAAAGCTATTTAGGTAGCGCCTCATGTATCACTGTAGGGGGTAGAGCACTGTTTCGG 298 Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGT-TTTAC 299 |||||||||||| |||||||||||||| |||||||||||||| | | ||| | Sbjct 297 CTAGGGGGTCATCCCGACTTACCAAACCGATGCAAACTCCGAATACCTACAAGTGCCGAG 238 Query 300 CGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | ||||| | ||| ||||||||| |||||| | ||| || || || ||| Sbjct 237 CATGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAAAGGGAAACAACCCAGACC 180 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 |||||||||| ||| || | | | ||||| | ||||| || || ||| ||||| Sbjct 179 GTCAGCTAAGGTCCCAAAGTTATGGTTAAGTGGGA--AACGATGTGGGAAGGCTTAGACA 122 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 ||||||| |||||||| |||||||||| | |||||||| |||||| |||||||||||| Sbjct 121 GCTAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTAGTC 63 Query 478 GAG 480 ||| Sbjct 62 GAG 60 >seq409 Length=714 Score = 104 bits (114), Expect = 8e-20 Identities = 136/187 (73%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 98 CGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAAC 157 ||||| ||| |||| | ||||| | ||||| ||||| |||| |||||||||||| | Sbjct 680 CGAACTCACATATGTGGCAAAATATAGAGATGATTTGTGGTTAGGAGTGAAAGGCTAATC 621 Query 158 AAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCA 217 ||||| ||| |||||||||| || ||||| ||||| | |||| || | | | | Sbjct 620 AAACTCGGAGATAGCTGGTTTTCCGCGAAATCTATTAAAGTAGAGCATTTATTTTATTTT 561 Query 218 TCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAAC 277 | ||||||||||||| | |||||||||| | | |||||| |||| || |||| Sbjct 560 TTTGGGGTAGAGCACTCATTAAGCTAGGGGGT-GTAACAACTTACTAAACTTTTAGAAAC 502 Query 278 TCCGAAT 284 | ||||| Sbjct 501 TACGAAT 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689411896832