Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq110 479 9e-133 seq206 293 8e-77 seq66 284 4e-74 seq617 183 1e-43 seq207 156 1e-35 seq2891 100 9e-19 seq479 96.9 1e-17 seq6324 75.2 4e-11 >seq110 Length=492 Score = 479 bits (530), Expect = 9e-133 Identities = 354/406 (87%), Gaps = 8/406 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 91 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 150 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 151 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 210 Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182 | ||||| |||| || ||| | | || | || | || || | |||| |||| Sbjct 211 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 269 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||||||||| | ||||||| Sbjct 270 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 326 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 327 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 386 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 387 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 446 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 447 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 492 >seq206 Length=167 Score = 293 bits (324), Expect = 8e-77 Identities = 165/167 (99%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 167 AGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTAGATGAC 108 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 107 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 48 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 47 GAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 1 >seq66 Length=447 Score = 284 bits (314), Expect = 4e-74 Identities = 283/360 (79%), Gaps = 15/360 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||| || Sbjct 91 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTCTG 150 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 | |||||||||||||||||||||||||||||||||||||| ||||| || || | || Sbjct 151 TTCTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGTTC 210 Query 127 GGCCCGCG---AAGGAC---CTTAACGCCAGAAAATGGT--CGGTGAAGA---CCAGTTC 175 |||| ||| || |||| | |||| || | ||||||| | || Sbjct 211 A-CCCGTACAAAAGCACAGGCTTATATCTAGAACTAGGCACCCGTGAAGATGGCTAGACA 269 Query 176 CGCTT-CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC 234 | || ||| | ||||||| | || ||| |||||||||||||||| || | || | Sbjct 270 CTATTTCATGGTATAAGTAAGACGACATTAAAAGTAGTGGTATTTCACTGTCGGCAAAGC 329 Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 ||||||||||| ||||||||| ||||||| |||||| ||| |||||||||||||||| Sbjct 330 --CTCCCACTTATACTACACCTCCTAAGTCATCTCACAACGTCAGACTAGAGTCAAGCTC 387 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 388 AACAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCT 447 >seq617 Length=23008 Score = 183 bits (202), Expect = 1e-43 Identities = 113/121 (93%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 12394 TGACGAGGCATTTGGCTACCTTAAGAGAGACATAGTTACTCCCGTCGTTTACCCGCGCTT 12335 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 |||||||| |||||| ||||||||||| | ||||||||||||||||||||| ||||||| Sbjct 12334 GGTTGAATCTCTTCATTTTGACATTCAAATCACTGGGCAGAAATCACATTGTATCAACAT 12275 Query 535 C 535 | Sbjct 12274 C 12274 >seq207 Length=101 Score = 156 bits (172), Expect = 1e-35 Identities = 95/101 (94%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367 ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 101 TTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAG 42 Query 368 GGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 |||||||||||||||| |||||||||||||||||||||||| Sbjct 41 GGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTA 1 >seq2891 Length=328 Score = 100 bits (110), Expect = 9e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 1 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 60 >seq479 Length=253 Score = 96.9 bits (106), Expect = 1e-17 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1 GTTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 58 >seq6324 Length=5559 Score = 75.2 bits (82), Expect = 4e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 71 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAAC 119 ||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct 1346 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCAC 1394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635017953184