Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq4362 232 2e-58 seq2797 156 1e-35 seq44 156 1e-35 seq8069 123 8e-26 >seq4362 Length=972 Score = 232 bits (256), Expect = 2e-58 Identities = 261/347 (75%), Gaps = 13/347 (4%) Strand=Plus/Minus Query 219 ACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAAT 278 ||| |||| ||| ||| || |||||||||||||||||||| | | || ||| | Sbjct 972 ACTGGCGTCCACGCTTCAAAGCCTCCCACCTATCCTACACAAGCAAATTCAAAGTCCAGT 913 Query 279 ACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGA-GCATCT 336 | |||||||||| ||||| | |||||||||| |||| |||||| || || |||||| Sbjct 912 GCAAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTAGCCGCG-GATACACTGCATCT 854 Query 337 TTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCA 396 | || | | ||||||||| | | || ||| |||||||| | ||||||||||| Sbjct 853 TCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCA 794 Query 397 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTA 456 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 793 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTA 734 Query 457 CCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGA 516 | ||||||||||| |||||||| || | || || | || ||| || Sbjct 733 CGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC----------GTTAGCTAACCC 684 Query 517 GTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 | |||||||||| ||||||||||||||||| || ||||| || Sbjct 683 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTC 637 >seq2797 Length=16102 Score = 156 bits (172), Expect = 1e-35 Identities = 182/243 (75%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 242 TCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-C 300 |||||| ||| ||||||| | | ||| ||||| || | |||| ||||| | | Sbjct 6003 TCCCACTTATACTACACATATTAAATAAAATAGCAATATAAAA-TGTAGTAAAGGTTCAC 5945 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||| | | || ||||||| || || | ||| ||||| Sbjct 5944 GGGGTCTTTCCGTCTAACTACAAAGAATCCGCATCTTCACGGATATTTCAAATTCACTAA 5885 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | || | | ||||||| |||| |||||||| |||||| |||||||||||||||||||| Sbjct 5884 GTCTATTTTGGAGACAGTAGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCG 5825 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||| || | |||||| ||||||||||||||| |||| Sbjct 5824 ACAAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACAGCCGCCGTTTACTGGGACTTCT 5765 Query 481 ATT 483 ||| Sbjct 5764 ATT 5762 >seq44 Length=490 Score = 156 bits (172), Expect = 1e-35 Identities = 200/277 (72%), Gaps = 19/277 (7%) Strand=Plus/Minus Query 288 TAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTAC 346 |||| ||||| | |||||||||| |||| | | || ||||||| || || Sbjct 461 TAGTAAAGGTTCACGGGGTCTTTCCGTCTAACTACAAAGAATCCGCATCTTCACGGATAT 402 Query 347 TGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGG 406 | ||| ||||| | || | | ||||||| |||| |||||||| |||||| |||||| Sbjct 401 TTCAAATTCACTAAGTCTATTTTGGAGACAGTAGGGATGTCGTTACACCATTCATGCAGG 342 Query 407 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGT 466 |||||||||||||||||||||||||||||||||||||| || | |||||| ||||||| Sbjct 341 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACAGCCGCCGT 282 Query 467 TTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAA 526 |||||||| |||| ||| | | || | || |||| |||| Sbjct 281 TTACTGGGACTTCTATT-------TTATGCAATA-----------TACATATCCTATTAA 240 Query 527 CCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||||||||| ||||| || ||||| || Sbjct 239 TCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATC 203 >seq8069 Length=772 Score = 123 bits (136), Expect = 8e-26 Identities = 154/205 (75%), Gaps = 7/205 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| ||| ||||||||||||||| | ||| ||| ||| |||| || ||| |||| | Sbjct 215 TCGACGTGTCTGTCTCGCAGTCAAGCGCGCTTTTGCCTTTATACTCTACGACC-GATTTC 157 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | ||| | ||||| | ||||| | | |||||||||| ||| ||| || ||||||||| Sbjct 156 CGACCGGTCTGAGCGCACCTTCGTACTCCTCCGTTACTCTTTAGGA-GGAGACCGCCCCA 98 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 || ||||||||||||| |||||||| | | || ||| | || || ||||| | || Sbjct 97 GTCAAACTACCCACCATACACTGTCCTCGATCCGGATAACGGACCTGAGTTAG--AACCT 40 Query 180 CTACG--GTCAGAGTGGTATTTCAA 202 | | | | ||| |||||||||||| Sbjct 39 CAAAGTTGCCAGGGTGGTATTTCAA 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702210471808