Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq151 143 2e-29 seq6453 120 2e-22 >seq151 Length=34927 Score = 143 bits (158), Expect = 2e-29 Identities = 962/1513 (64%), Gaps = 63/1513 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||| ||||| |||| || | || | ||||||||||| || || Sbjct 29138 ATCGACTGTGAATTGGATTGCATCTGCTCTTGGACGTGTTCGGAGATAGTACATTCCTGT 29197 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195 |||||| || ||| || |||||||||||||| | | | ||| | | | |||| | Sbjct 29198 CTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAAG-TGAGTTTACTGACAGTCGGGT 29256 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 |||| | || ||||| | || ||||||||| ||||| || ||||| ||||||| Sbjct 29257 CGGCAATGTGAATATTTAGTGATTGACTCTGACAAATGTACGCTCCTCGATCGGCAGCCA 29316 Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 |||| | || || | | | || ||||| || || |||||| || | | Sbjct 29317 TGTCCAAAAT-CGCCTTTTGCTTGATTTCCCAAACTGTTTTGTACTTTTCTTTCACATGA 29375 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGA-CGTGCAATAATGCGATTACGCAT 65373 ||||| || | || | || || ||||| ||| || | || || |||| || | Sbjct 29376 GAAGGAATTTCAGCGATATTTTGTACGGAACCGCGATCGCG-AAGGATTTGATTCCGAA- 29433 Query 65374 CGACTC-TGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC-- 65430 || || || ||||||| || || ||||| | || ||| | || ||| |||| Sbjct 29434 CGTCTGATGTCCACAAATTCATCTCAATAAGCTCTT---CCATGAGATATTTGTTGACAA 29490 Query 65431 TTGGAACT-CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 ||| || | | || | || || || || | |||||||| |||| || || | | Sbjct 29491 TTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGTTGGAAGTGAACGGCTCGATAG 29550 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 | || ||||| |||||||| || || || || |||||||| ||||||| || ||| | Sbjct 29551 ACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTGGCATCGGAGCGAGCAGCAAAG 29610 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC--ATCGG 65607 ||||||| | ||||| | | | | | ||| | | ||| | ||| | ||| Sbjct 29611 AGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACTGCTTCCAATCCCATCGACCGG 29670 Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667 |||| || || || |||||||||| ||| | | | || ||| | ||||| Sbjct 29671 A--ATCGG-GA-ATG-ACCTGCCACATATCAAATTGAAAGATACCTCGACTAACTGGTGA 29725 Query 65668 ACCGAGGAAA-CTATCGTACACTCCCTCCTCCT-TGGCAAGT---TGACAGCTGGTCTCG 65722 || || | | || |||||| ||| ||| || ||| | || |||| || Sbjct 29726 TCC-AGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCATGGAAGCT----TCC 29780 Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC 65782 | || || ||||| || || || ||||| | || || || || || | | ||| Sbjct 29781 ATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAGCAGCTTTGCTT 29840 Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842 || | || | || |||||| | ||| || ||||| ||||||||||| || || || || Sbjct 29841 TCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGCCGATTCCAATC 29900 Query 65843 GGACGATGACGCAAATTGGA-ACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 || ||||| ||| |||| || | | || ||||| | || || ||||||| ||| || Sbjct 29901 GGTCGATGTCGCTGATTGCTCACTTGT-GCTTCAGGAATCGGATAATAATTGAGATCAAT 29959 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAA 65960 || || | ||| || || | | ||| ||| |||| | | || | || Sbjct 29960 GATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTAT-AATTTTGCAAACTGAA 30018 Query 65961 AATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGA 66020 | | ||| | || || ||||| || | | || | || || | Sbjct 30019 ATTCTTT-----------------CTGATAC-ACAAATTTTGACAATGCGATGGAAGCCA 30060 Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAG-CGGTATACTCGACAATTTCGGTGCACAGATTA 66079 ||||| || || | || | |||| | | ||||||| ||||| ||| ||||| Sbjct 30061 AATTGCATACTGCCACTTCTTT-GGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTG 30119 Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 || | || ||||| || | |||||| ||||| || ||||| || || || ||||| Sbjct 30120 CTTGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAA 30179 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC-G 66198 | ||| ||||| || |||||||||| || || | ||||| ||| | | || | Sbjct 30180 AGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA-ATTGCTG 30238 Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGA 66257 || || || || | | | | | |||| | ||||| | ||| || | || | Sbjct 30239 GGCTTTGACAGT-CTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAA 30297 Query 66258 AG--GATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 | | ||| ||||| || | || | |||| || || ||||| | | ||| Sbjct 30298 ATTCGCTTC--CCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCA 30355 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 || | | ||| ||||| |||||| ||||| || ||||| || || || || | Sbjct 30356 TTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAA 30415 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 ||| |||||||| || ||| | || ||||| || || | || || ||||||||||| Sbjct 30416 ATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGAT 30475 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 || |||||||| || || || || || || || || || | || || || |||||||| Sbjct 30476 ATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTG 30535 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 || ||||| ||||| | ||||| || || | ||| || || | || || || | Sbjct 30536 ATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACT 30595 Query 66556 GCCATTGGTGCCG 66568 ||||| || ||| Sbjct 30596 TCCATTCGTCCCG 30608 >seq6453 Length=80198 Score = 120 bits (132), Expect = 2e-22 Identities = 371/565 (66%), Gaps = 22/565 (4%) Strand=Plus/Plus Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143 || |||||| |||||| || || || || || ||| ||||| | || || ||||| Sbjct 48689 GAGATTTGGGACATGTATAAGAAAGCAGAGGCAAGCTTTTGGACCGCAGAAGAAATCGAT 48748 Query 61144 TTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||| | ||||||||||||||| | ||||| | ||| ||| || || ||| Sbjct 48749 TTGGTGCATGACATGAATGACTGGCTTAATATATCGGACAATGAGAGACACTTTATCAAA 48808 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTT----ATTGGA 61259 || |||||||| |||||||| || || || || || ||||| ||| | || || Sbjct 48809 CACGTGTTGGCCTTCTTTGCAGCCAGTGATGGGATTGTTAATGAAAATCTCGCCAT--GA 48866 Query 61260 ACGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318 | |||| |||| ||||| ||| | |||| || || || || || || ||||| |||| Sbjct 48867 A--TTTC-AGCAGTGAGGTTCAAATCCCGGAAGCTCGATGCTTTTATGGATTCCAAATTG 48923 Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 | || || ||| | |||||||| |||| | | || ||||| ||||||| || | Sbjct 48924 CAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATC 48983 Query 61379 GGGCGGAACGTGAACGATTGTTCAAT--GCCATCGAGACGATACCGGCGGTGAAGCGGAA 61436 | ||| | | ||| | | || || || || || || ||| || | || Sbjct 48984 CAACCGAAAAACAGC-ATT-TACTATGCGCGATTGAAACAATCCCGTGCGTTACCAATAA 49041 Query 61437 AGCGGATTGGGCCTTCAATTG----GATCACCAGTACAACGGCTACATTTGGTGAACGAT 61492 ||| | ||||| || || || |||| |||| || | |||| ||| || Sbjct 49042 AGCACAATGGGCGTTGAAATGGTGCGATCCAAAGTA----TGCCTCGTTTGCAGAAAGAG 49097 Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552 || | || ||||||| ||||| || | |||||| ||||| || | | || |||| Sbjct 49098 TGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATATTTT 49157 Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612 || |||||||||| ||| | ||||| || || ||| |||||| | || || | Sbjct 49158 GGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTCGTG 49217 Query 61613 ACGAGGGCATGCATTGTGATTTTGC 61637 | || || | |||||||| ||||| Sbjct 49218 ATGAAGGACTACATTGTGACTTTGC 49242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397514056607120