Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq39 268 1e-69 seq2654 91.5 2e-16 >seq39 Length=1009 Score = 268 bits (296), Expect = 1e-69 Identities = 199/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| || |||||||||||| | Sbjct 302 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCATTTACTAGGAATT-C 359 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| |||| | |||||||| ||||||||| | ||||||| |||| |||||| Sbjct 360 CTCGTTCAAGATTGAAAATTGCAACAATCTATCCCTAGCACGATGCGCATTTACAAGATT 419 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 420 ACCCAGACCTATCGGTCAAGGTTTTAAACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 479 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 480 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 528 >seq2654 Length=10441 Score = 91.5 bits (100), Expect = 2e-16 Identities = 81/102 (79%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 || |||||| || ||| |||||| ||| |||||| ||||||||||||||||||||||| Sbjct 2877 GGTCAAGGTTTTAAACTTGTTGAACGCATGAGTGTAACGCGCGTGCGGCCCAGAACATCT 2936 Query 193 AAGGG------CATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| || |||||| |||| |||||| ||||||| Sbjct 2937 AAGGGTATATATATTACAGACGTGTTGTTGCCTACAACTTCC 2978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751913097235