Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq72 268 4e-69 seq823 95.1 5e-17 seq6320 91.5 6e-16 >seq72 Length=3157 Score = 268 bits (296), Expect = 4e-69 Identities = 255/324 (79%), Gaps = 28/324 (9%) Strand=Plus/Plus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||| ||||| | |||||||||||| |||||||||||||||||||||||| | || Sbjct 828 TGGCGAAATGGAGCGATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTG 887 Query 447 CGAGTGTTTGGGTGTC-AAACCCGTGCGCGTAATGAAAGTGAACGG-------------- 491 | ||| ||||||||| |||||| | ||||||||||||| || || Sbjct 888 CAAGTATTTGGGTGTTGAAACCCCAGTGCGTAATGAAAGTAAAGGGTAATGTAGATTGCC 947 Query 492 --AGGTGGGAACCCG-TG-AGGGTGC----ACCATCGACCGATCCTGATGTCTTCG---- 539 |||| |||| || || | ||||| || ||||||||||| ||| ||||| Sbjct 948 TTAGGTAGGAAAGCGCTGTATGGTGCTGGCACTATCGACCGATCATGAAC-CTTCGTGGT 1006 Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 || ||||||||| ||||| | |||||| ||||||||||||||||||||||||||| | Sbjct 1007 GAAAGATTTGAGTTTGAGCACATATGTTGGTACCCGAAAGATGGTGAACTATGCCTGAGT 1066 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||||||||||||| ||||||||||||||| ||||| |||| ||||| ||||||||||||| Sbjct 1067 AGGGTGAAGCCAGGGGAAACTCTGGTGGAAGCTCGTAGCGATTCTGACGTGCAAATCGAT 1126 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 ||||||| |||||||||||||||| Sbjct 1127 CGTCAAACTTGGGTATAGGGGCGA 1150 Score = 176 bits (194), Expect = 2e-41 Identities = 135/160 (84%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || | || |||||||| | ||||||||||||| Sbjct 304 GAGTCGCGTTGTTTGGGAATGCAGCGCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAAT 363 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 364 ATAAGTGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 423 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||| || || ||||| || ||||||||||||| Sbjct 424 AGAGAGTTAAAGAGTACCTGAAACTGCTGAAAGGGAAGCG 463 >seq823 Length=18452 Score = 95.1 bits (104), Expect = 5e-17 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 61 CAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCG 120 |||| | || | || |||||||| | ||||||||||||||| | ||||||| ||||| Sbjct 2348 CAGCGCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAATATAAGTGCGAGACCGGTAGCG 2289 Query 121 CACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAA 160 ||||||| |||| ||||||||||||| |||||||||| Sbjct 2288 AACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGGAAA 2249 >seq6320 Length=1479 Score = 91.5 bits (100), Expect = 6e-16 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 411 GTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCAAACCCG 469 |||||| |||||||||||||||||||||||| | ||| ||| |||||||| | |||||| Sbjct 1162 GTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCAAGTATTTGGGTGTTGAAACCCC 1103 Query 470 TGCGCGTAATGAAAGTGAACGG 491 | ||||||||||||| || || Sbjct 1102 AGTGCGTAATGAAAGTAAAGGG 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079744122950