Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq272 116 5e-24 >seq272 Length=492 Score = 116 bits (128), Expect = 5e-24 Identities = 171/242 (71%), Gaps = 20/242 (8%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| ||||||||||| ||||| || |||||||| ||||| | || ||| | ||| Sbjct 254 CTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCAT-TTAGCAGAGTCCT 312 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126 ||||||||| ||||||||||| ||||| ||| | || ||| || | Sbjct 313 GTGTTTTTATTAAACAGTCGCAACCCTCAATT-TTTGTGAC-------------ACCTTT 358 Query 127 CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186 ||| | | || || | ||||||||||||||| | | ||||||||||| |||||| Sbjct 359 TGTTAA-----AAAGGTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTT 413 Query 187 AACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246 | | ||||| | || ||||||| | || || | | ||||||||||||||| || Sbjct 414 CAAAATAGTTCTCTTATACACCTTAGTCTATTCGACTTATCTACCTGTGTCGGTTTAAGG 473 Query 247 TA 248 || Sbjct 474 TA 475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694319753617