Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq138 194 5e-47 seq49 172 2e-40 >seq138 Length=349 Score = 194 bits (214), Expect = 5e-47 Identities = 255/350 (73%), Gaps = 29/350 (8%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||| Sbjct 22 TACGATCGCAAGGTTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCAT 81 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||| ||||||||||||| |||||| | | ||| | Sbjct 82 GTGGTTTAATTCGATAATACGCGCAGAACCTTACCAACTCTTGAAA--ATTTGA----TT 135 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | | ||| ||| || ||||||| ||||||| ||||||||| Sbjct 136 AAAAAATA---ATTTTAGTTT------------AAACAGGTGTTGCATGGCTGTCGTCAG 180 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||| |||| ||||| |||||| ||| |||| |||||||| || |||||||| Sbjct 181 TCCGTGTTGTGAAATGTTTGGTTAATTCCTTTAACGGACGCAACCCCTATTATTAGTTGC 240 Query 241 CA--TCATT--AAGT---TGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGG 293 || | ||| || | ||||||||| |||| | ||| ||| | ||||| | Sbjct 241 CACTTTATTTAAAATATAAAAGCACTCTAATAAAACTGTCAATGATAAATTGAAGGAA-G 299 Query 294 TGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGT 343 |||||| || ||||| || ||||| ||||||||| ||||||||||||||| Sbjct 300 TGGGGATGAGGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGT 349 >seq49 Length=228 Score = 172 bits (190), Expect = 2e-40 Identities = 161/203 (79%), Gaps = 5/203 (2%) Strand=Plus/Plus Query 294 TGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG 353 |||||| || ||||| || ||||| ||||||||| ||||||||||||||||||||||||| Sbjct 1 TGGGGATGAGGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATGG 60 Query 354 ACAATACAAAGGGCAGCGAAACCGCG----AGGTCAAGCAAATCCCATAAAGTTGTTCTC 409 | ||||| | | || | | | | | |||||||| |||||| | || Sbjct 61 TAATTACAATGAGACGCAATAATGTTTTTAAATTGGAGCAAATCTTTAAAAGTTAT-CTT 119 Query 410 AGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGAT 469 |||||||||| ||| ||| |||||| ||||||||||||||||||||||||||||| ||| Sbjct 120 AGTTCGGATTATAGGCTGAAACTCGCCTATATGAAGCTGGAATCGCTAGTAATCGCAGAA 179 Query 470 CAGCATGCTACGGTGAATACGTT 492 ||||||||| ||||||||| ||| Sbjct 180 CAGCATGCTGCGGTGAATATGTT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503820587840