Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq124 104 5e-20 seq1943 80.6 5e-13 >seq124 Length=866 Score = 104 bits (114), Expect = 5e-20 Identities = 135/184 (73%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 8 CTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGA-GTCT 66 ||| |||| | |||| | |||||| ||| || || ||||||||||| || | || | Sbjct 772 CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCTCACTGCTGCCTTTTTTAAAAAGTTT 713 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||| |||||||||||||||||| | || || ||| || |||| ||| | || Sbjct 712 GGGCCGTTTCTCAGTCCCAATGTGGCTGATCGTTCTTTCAAACCAGCTAAAGATTGCAGG 653 Query 127 CTTGGT-GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGAT 185 |||||| | |||||| ||||||||||||||| ||| | | ||||||| | || | Sbjct 652 CTTGGTAAGTCTATTAAACTACCAACTACCTAATCTTACGCAAACTCATCTTTTAACGTT 593 Query 186 AAAT 189 | || Sbjct 592 ATAT 589 >seq1943 Length=3773 Score = 80.6 bits (88), Expect = 5e-13 Identities = 95/128 (74%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGT--AGGAGT 64 |||| |||| | |||| | |||||| ||| || || |||||||||| | | ||| Sbjct 1396 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCTCACTGCTGCCCTTTTTTAAAAAGT 1455 Query 65 CTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTC 124 |||||||| |||||||||||||||||| | || || ||| || |||| ||| || Sbjct 1456 TTGGGCCGTTTCTCAGTCCCAATGTGGCTGATCGTTCTTTCAAACCAGCTAAAGATTGTA 1515 Query 125 GGCTTGGT 132 |||||||| Sbjct 1516 GGCTTGGT 1523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998280900864