Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq49 86.0 5e-15 seq138 75.2 9e-12 >seq49 Length=228 Score = 86.0 bits (94), Expect = 5e-15 Identities = 107/145 (74%), Gaps = 5/145 (3%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCG--- 58 |||||| ||| ||| |||||| |||| |||| ||||| |||| ||||| | Sbjct 144 CGAGTTTCAGCCTATAATCCGAACTAAGATA-ACTTTTAAAGATTTGCTCCAATTTAAAA 86 Query 59 -CGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGG 117 | | ||| | | |||| |||||||||| ||||||| ||||| || |||||||| Sbjct 85 ACATTATTGCGTCTCATTGTAATTACCATTGTAGCACGTGTGTAGCCCAACTCATAAGGG 26 Query 118 CCATGAGGACTTGACGTCATCCCCA 142 |||||| |||||||| ||||||||| Sbjct 25 CCATGAAGACTTGACCTCATCCCCA 1 >seq138 Length=349 Score = 75.2 bits (82), Expect = 9e-12 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 93 ACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||||||| ||||| || |||||||||||||| |||||||| ||||||||| |||||| | Sbjct 349 ACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACCTCATCCCCA-CTTCCTTCA 291 Query 153 GTTTGTCA 160 ||| ||| Sbjct 290 ATTTATCA 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415951926130