Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1943 143 8e-32 seq124 138 3e-30 >seq1943 Length=3773 Score = 143 bits (158), Expect = 8e-32 Identities = 185/251 (74%), Gaps = 6/251 (2%) Strand=Plus/Minus Query 192 CTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAG 251 ||||||||| | || ||| |||| | ||| || |||| |||||||||| |||||| Sbjct 1526 CTTACCAAGCCTACAATCTTTAGCTGGTTTGAAAGAACGATCAGCCACATTGGGACTGAG 1467 Query 252 ACACGGTCCAAACTCCTACGGGA--GGCAGCAGTGGGGAATATTGCACAATGGGCAAAAG 309 | |||| ||||||| | | |||||||||| ||||| ||| |||||| || |||| Sbjct 1466 AAACGGCCCAAACTTTTTAAAAAAGGGCAGCAGTGAGGAATTTTGGACAATGAGCGAAAG 1407 Query 310 CCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCG-GGTCGTAAAGCTCTGTCCTC 368 | |||| |||||| || |||| || |||||| ||| |||| |||| || | Sbjct 1406 CTTGATCCAGCAATACCAAGTGACTGAAGAAGGCTAAATAGGTTATAAAACTCTATCGTT 1347 Query 369 AAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTAC--GTGCCAGCAGCC 426 ||||| || |||||| |||||| | || ||| | |||||| ||| |||||||||| | Sbjct 1346 AAGGAGGAAAATGACAGTACTTAAAGAAGAAATTCTGGCTAA-TACCCGTGCCAGCAGTC 1288 Query 427 GCGGTAATACG 437 ||||||||||| Sbjct 1287 GCGGTAATACG 1277 >seq124 Length=866 Score = 138 bits (152), Expect = 3e-30 Identities = 186/254 (73%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGG-CTTACCAAGGCGACGATCAGTAGCCGAC 219 |||| |||||| ||||||||| ||| | ||||||||| | | ||| |||| | Sbjct 612 GCGTAAGATTAGGTAGTTGGTAGTTTAATAGACTTACCAAGCCTGCAATCTTTAGCTGGT 671 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCT-ACGGGAGGCA 278 ||| || |||| |||||||||| ||||||| |||| ||||||| | | ||||| Sbjct 672 TTGAAAGAACGATCAGCCACATTGGGACTGAGAAACGGCCCAAACTTTTTAAAAAAGGCA 731 Query 279 GCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCA-GCAACGCCGCGTGAGCGAT 337 |||||| ||||| ||| |||||| || ||||| |||| || |||| || ||||| || Sbjct 732 GCAGTGAGGAATTTTGGACAATGAGCGAAAGCTTGATCCAGGCAATACCAAGTGAGTGAA 791 Query 338 GAAGGC-CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAG 396 |||||| ||| ||||| |||| || | ||||| || |||||| |||||| | || Sbjct 792 GAAGGCTAAATAGGTTGTAAAACTCTTTCGTTAAGGAGGAAAATGACAGTACTTAAAGAA 851 Query 397 GAAGCCCCGGCTAA 410 |||| | |||||| Sbjct 852 GAAGTTCTGGCTAA 865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497421351296