Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10]
11,929 sequences; 33,184,526 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq42 118 3e-24
>seq42
Length=411
Score = 118 bits (130), Expect = 3e-24
Identities = 220/318 (69%), Gaps = 4/318 (1%)
Strand=Plus/Minus
Query 29 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAA 88
||||||||||| |||||||||||| | || ||| |||| | ||| | | |||||||
Sbjct 409 CGTGCCAGCAGTCGCGGTAATACGGGAAGAGCGAGCATTATTCAAAATGATTAGGCGTAA 350
Query 89 AGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTG 148
||||| |||||| |||| |||||| | ||| || ||||||| ||
Sbjct 349 AGGGTTTGTAGGTTGTTTTTTAAGTTGAAAAGAAAATAATAAAGCTCAACTTTATCTCTT 290
Query 149 CTTTTGAAACTGCAGGGCTAGAGTGCAGG-AGGGGCAAGTGGAATTCCTAGTGTAGCGGT 207
||| ||||| | ||||||| | || || | | ||||| || || || | |
Sbjct 289 TTTTCAAAACTAAAAAACTAGAGTATACATAGAGGATAATAGAATTTTTATTGGAGGGAT 230
Query 208 GAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA-ACT 266
|||| | |||| ||| ||||| | || ||||| || | |||| | || |||
Sbjct 229 AAAATCTATTGATAATAGAAGGAATATCAAAAGCGAAAGCAATTATCTGGG-TATATACT 171
Query 267 GACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTA-GATACCCTGGTAGTCCACGC 325
||||||||| ||||||| |||| ||| ||| ||| || ||||||| ||||||||| ||
Sbjct 170 GACACTGAGAAACGAAAGCTTGGGTAGCGAACGGGAATAAGATACCCCGGTAGTCCATGC 111
Query 326 CGTAAACGATGAATACTA 343
||||||||||| | |||
Sbjct 110 TGTAAACGATGAGTGCTA 93
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203056470272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |