Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq7734 159 1e-36 seq272 158 4e-36 >seq7734 Length=9756 Score = 159 bits (176), Expect = 1e-36 Identities = 182/243 (75%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 242 TCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-C 300 |||||| ||| ||||||| | | ||| ||||| || | |||| ||||| | | Sbjct 6004 TCCCACTTATACTACACATATTAAATAAAATAGCAATATAAAAATGTAGTAAAGGTTCAC 5945 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||| | | || ||||||| || || | ||| ||||| Sbjct 5944 GGGGTCTTTCCGTCTAACTACAAAGAATCCGCATCTTCACGGATATTTCAAATTCACTAA 5885 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | || | | ||||||| |||| |||||||| |||||| |||||||||||||||||||| Sbjct 5884 GTCTATTTTGGAGACAGTAGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCG 5825 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||| || | |||||| ||||||||||||||| |||| Sbjct 5824 ACAAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACAGCCGCCGTTTACTGGGACTTCT 5765 Query 481 ATT 483 ||| Sbjct 5764 ATT 5762 >seq272 Length=492 Score = 158 bits (174), Expect = 4e-36 Identities = 208/290 (72%), Gaps = 19/290 (7%) Strand=Plus/Plus Query 275 CAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCA 333 ||||| || | |||| ||||| | |||||||||| |||| | | || ||| Sbjct 18 CAATATAAAAATGTAGTAAAGGTTCACGGGGTCTTTCCGTCTAACTACAAAGAATCCGCA 77 Query 334 TCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACG 393 |||| || || | ||| ||||| | || | | ||||||| |||| |||||||| Sbjct 78 TCTTCACGGATATTTCAAATTCACTAAGTCTATTTTGGAGACAGTAGGGATGTCGTTACA 137 Query 394 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 |||||| |||||||||||||||||||||||||||||||||||||||||||| || | || Sbjct 138 CCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCAGAG 197 Query 454 TTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCA 513 |||| ||||||||||||||| |||| ||| | | || | | Sbjct 198 TTACAGCCGCCGTTTACTGGGACTTCTATT-------TTATGCAATA-----------TA 239 Query 514 CGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 | |||| |||| |||||||||||||||||| ||||| || ||||| || Sbjct 240 CATATCCTATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATC 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702196920704