Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326045.1_202012-09-10] 11,929 sequences; 33,184,526 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq113 140 3e-28 seq3366 120 2e-22 >seq113 Length=12257 Score = 140 bits (154), Expect = 3e-28 Identities = 961/1513 (64%), Gaps = 63/1513 (4%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||| ||||| |||| || | || | |||| |||||| || || Sbjct 5887 ATCGACTGTGAATTGGATTGCATCTGCTCTTGGACGTGTTCGGAGATGGTACATTCCTGT 5828 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195 |||||| || ||| || |||||||||||||| | | | ||| | | | |||| | Sbjct 5827 CTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAAG-TGAGTTTACTGACAGTCGGGT 5769 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 |||| | || ||||| | || ||||||||| ||||| || ||||| ||||||| Sbjct 5768 CGGCAATGTGAATATTTAGTGATTGACTCTGACAAATGTACGCTCCTCGATCGGCAGCCA 5709 Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 |||| | || || | | | || ||||| || || |||||| || | | Sbjct 5708 TGTCCAAAAT-CGCCTTTTGCTTGATTTCCCAAACTGTTTTGTACTTTTCTTTCACATGA 5650 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGA-CGTGCAATAATGCGATTACGCAT 65373 ||||| || | || | || || ||||| ||| || | || || |||| || | Sbjct 5649 GAAGGAATTTCAGCGATATTTTGTACGGAACCGCGATCGCG-AAGGATTTGATTCCGAA- 5592 Query 65374 CGACTC-TGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC-- 65430 || || || ||||||| || || ||||| | || ||| | || ||| |||| Sbjct 5591 CGTCTGATGTCCACAAATTCATCTCAATAAGCTCTT---CCATGAGATATTTGTTGACAA 5535 Query 65431 TTGGAACT-CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 ||| || | | || | || || || || | |||||||| |||| || || | | Sbjct 5534 TTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGTTGGAAGTGAACGGCTCGATAG 5475 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 | || ||||| |||||||| || || || || |||||||| ||||||| || ||| | Sbjct 5474 ACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTGGCATCGGAGCGAGCAGCAAAG 5415 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC--ATCGG 65607 ||||||| | ||||| | | | | | ||| | | ||| | ||| | ||| Sbjct 5414 AGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACTGCTTCCAATCCCATCGACCGG 5355 Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667 |||| || || || |||||||||| ||| | | | || ||| | ||||| Sbjct 5354 A--ATCGG-GA-ATG-ACCTGCCACATATCAAATTGAAAGATACCTCGACTAACTGGTGA 5300 Query 65668 ACCGAGGAAA-CTATCGTACACTCCCTCCTCCT-TGGCAAGT---TGACAGCTGGTCTCG 65722 || || | | || |||||| ||| ||| || ||| | || |||| || Sbjct 5299 TCC-AGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCATGGAAGCT----TCC 5245 Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC 65782 | || || ||||| || || || ||||| | || || || || || | | ||| Sbjct 5244 ATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAGCAGCTTTGCTT 5185 Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842 || | || | || |||||| | ||| || ||||| ||||||||||| || || || || Sbjct 5184 TCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGCCGATTCCAATC 5125 Query 65843 GGACGATGACGCAAATTGGA-ACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 || ||||| ||| |||| || | | || ||||| | || || ||||||| ||| || Sbjct 5124 GGTCGATGTCGCTGATTGCTCACTTGT-GCTTCAGGAATCGGATAATAATTGAGATCAAT 5066 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAA 65960 || || | ||| || || | | ||| ||| |||| | | || | || Sbjct 5065 GATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTAT-AATTTTGCAAACTGAA 5007 Query 65961 AATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGA 66020 | | ||| | || || ||||| || | | || | || || | Sbjct 5006 ATTCTTT-----------------CTGATAC-ACAAATTTTGACAATGCGATGGAAGCCA 4965 Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAG-CGGTATACTCGACAATTTCGGTGCACAGATTA 66079 ||||| || || | || | |||| | | ||||||| ||||| ||| ||||| Sbjct 4964 AATTGCATACTGCCACTTCTTT-GGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTG 4906 Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 || | || ||||| || | |||||| ||||| || ||||| || || || ||||| Sbjct 4905 CTTGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAA 4846 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC-G 66198 | ||| ||||| || |||||||||| || || | ||||| ||| | | || | Sbjct 4845 AGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA-ATTGCTG 4787 Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGA 66257 || || || || | | | | | |||| | ||||| | ||| || | || | Sbjct 4786 GGCTTTGACAGT-CTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAA 4728 Query 66258 AG--GATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 | | ||| ||||| || | || | |||| || || ||||| | | ||| Sbjct 4727 ATTCGCTTC--CCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCA 4670 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 || | | ||| ||||| |||||| ||||| || ||||| || || || || | Sbjct 4669 TTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAA 4610 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 ||| |||||||| || ||| | || ||||| || || | || || ||||||||||| Sbjct 4609 ATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGAT 4550 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 || |||||||| || || || || || || || || || | || || || |||||||| Sbjct 4549 ATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTG 4490 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 || ||||| ||||| | ||||| || || | ||| || || | || || || | Sbjct 4489 ATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACT 4430 Query 66556 GCCATTGGTGCCG 66568 ||||| || ||| Sbjct 4429 TCCATTCGTCCCG 4417 >seq3366 Length=157547 Score = 120 bits (132), Expect = 2e-22 Identities = 371/565 (66%), Gaps = 22/565 (4%) Strand=Plus/Minus Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143 || |||||| |||||| || || || || || ||| ||||| | || || ||||| Sbjct 39811 GAGATTTGGGACATGTATAAGAAAGCAGAGGCAAGCTTTTGGACCGCAGAAGAAATCGAT 39752 Query 61144 TTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||| | ||||||||||||||| | ||||| | ||| ||| || || ||| Sbjct 39751 TTGGTGCATGACATGAATGACTGGCTTAATATATCGGACAATGAGAGACACTTTATCAAA 39692 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTT----ATTGGA 61259 || |||||||| |||||||| || || || || || ||||| ||| | || || Sbjct 39691 CACGTGTTGGCCTTCTTTGCAGCCAGTGATGGGATTGTTAATGAAAATCTCGCCAT--GA 39634 Query 61260 ACGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318 | |||| |||| ||||| ||| | |||| || || || || || || ||||| |||| Sbjct 39633 A--TTTC-AGCAGTGAGGTTCAAATCCCGGAAGCTCGATGCTTTTATGGATTCCAAATTG 39577 Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 | || || ||| | |||||||| |||| | | || ||||| ||||||| || | Sbjct 39576 CAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATC 39517 Query 61379 GGGCGGAACGTGAACGATTGTTCAAT--GCCATCGAGACGATACCGGCGGTGAAGCGGAA 61436 | ||| | | ||| | | || || || || || || ||| || | || Sbjct 39516 CAACCGAAAAACAGC-ATT-TACTATGCGCGATTGAAACAATCCCGTGCGTTACCAATAA 39459 Query 61437 AGCGGATTGGGCCTTCAATTG----GATCACCAGTACAACGGCTACATTTGGTGAACGAT 61492 ||| | ||||| || || || |||| |||| || | |||| ||| || Sbjct 39458 AGCACAATGGGCGTTGAAATGGTGCGATCCAAAGTA----TGCCTCGTTTGCAGAAAGAG 39403 Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552 || | || ||||||| ||||| || | |||||| ||||| || | | || |||| Sbjct 39402 TGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATATTTT 39343 Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612 || |||||||||| ||| | ||||| || || ||| |||||| | || || | Sbjct 39342 GGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTCGTG 39283 Query 61613 ACGAGGGCATGCATTGTGATTTTGC 61637 | || || | |||||||| ||||| Sbjct 39282 ATGAAGGACTACATTGTGACTTTGC 39258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397510199700560