Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq53 268 1e-69 seq400 89.7 8e-16 >seq53 Length=722 Score = 268 bits (296), Expect = 1e-69 Identities = 199/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| || |||||||||||| | Sbjct 514 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCATTTACTAGGAATT-C 457 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| |||| | |||||||| ||||||||| | ||||||| |||| |||||| Sbjct 456 CTCGTTCAAGATTGAAAATTGCAACAATCTATCCCTAGCACGATGCGCATTTACAAGATT 397 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 396 ACCCAGACCTATCGGTCAAGGTTTTAAACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 337 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 336 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 288 >seq400 Length=65022 Score = 89.7 bits (98), Expect = 8e-16 Identities = 80/101 (79%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 || |||||| || ||| |||||| ||| |||| | |||||||||||||||||||||| Sbjct 34845 GGTCAAGGTTTTAAACTTGTTGAACGCATGAGTGCAATGCGCGTGCGGCCCAGAACATCT 34786 Query 193 AAGGG------CATCACAGACCTGTTATTGCCTCAAACTTC 227 ||||| ||||||||| ||||||||||| |||||| Sbjct 34785 AAGGGTATATATATCACAGACGTGTTATTGCCTACAACTTC 34745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751911050150