Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1446 233 4e-59 seq242 161 2e-37 seq268 93.3 8e-17 seq5865 80.6 5e-13 seq269 75.2 2e-11 >seq1446 Length=466 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 62 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 121 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| |||||| | ||| || |||||||| Sbjct 122 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 180 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 181 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 240 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 241 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 299 Query 311 GTTAGGGG 318 ||| |||| Sbjct 300 GTTGGGGG 307 >seq242 Length=387 Score = 161 bits (178), Expect = 2e-37 Identities = 144/177 (81%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCAT 130 |||||| |||||||||||||||||| ||||||||| ||||||| |||||| | ||||| Sbjct 177 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACTTCAGCAT 118 Query 131 GGAATAATAGAATAGGACGTGCG-GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||| ||| | | | |||||||||||||||| | ||| ||||||| Sbjct 117 GGAATAATAAGATACGACCTTGGTGGTCTATTTTGTTGGTTTGCAC-ACCAGGGTAATGA 59 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 |||||||||| ||| |||||| | |||| | |||||||||||||||||||||| Sbjct 58 TTAATAGGGACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGAT 2 >seq268 Length=115 Score = 93.3 bits (102), Expect = 8e-17 Identities = 91/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 || ||| |||||| | |||| | |||||||||||||||||||||| | |||| Sbjct 1 GACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGATCGTTGAAAGAT 60 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 | || |||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct 61 GAGCTTAGGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 115 >seq5865 Length=619 Score = 80.6 bits (88), Expect = 5e-13 Identities = 73/91 (80%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||||| | | | ||||||||||||||||| ||| |||||| | Sbjct 324 TCTATTTTGTTGGTTTGCACTCCAGG-GTAATGATTAATAGGGACAGTTGGGGGTATTCA 382 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 |||| | |||||||||||||||||||||| Sbjct 383 TATTTCAACGTCAGAGGTGAAATTCTTGGAT 413 >seq269 Length=216 Score = 75.2 bits (82), Expect = 2e-11 Identities = 49/53 (92%), Gaps = 1/53 (2%) Strand=Plus/Minus Query 266 GCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct 213 GCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915088254080