Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq59 205 4e-50 seq67 176 2e-41 seq2178 100 1e-18 seq1709 95.1 5e-17 seq384 91.5 6e-16 >seq59 Length=313 Score = 205 bits (226), Expect = 4e-50 Identities = 152/176 (86%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 512 GCACCATCGACCGATCCTGATGTCTTCG----GATGGATTTGAGTAAGAGCATAGCTGTT 567 |||| ||||||||||| ||| ||||| || ||||||||| ||||| | |||| Sbjct 73 GCACTATCGACCGATCATGAAC-CTTCGTGGTGAAAGATTTGAGTTTGAGCACATATGTT 131 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 || ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 132 GGTACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCCAGGGGAAACTCTGGTGG 191 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||| |||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct 192 AAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 247 >seq67 Length=833 Score = 176 bits (194), Expect = 2e-41 Identities = 135/160 (84%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || | || |||||||| | ||||||||||||| Sbjct 248 GAGTCGCGTTGTTTGGGAATGCAGCGCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAAT 189 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 188 ATAAGTGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 129 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||| || || ||||| || ||||||||||||| Sbjct 128 AGAGAGTTAAAGAGTACCTGAAACTGCTGAAAGGGAAGCG 89 >seq2178 Length=296 Score = 100 bits (110), Expect = 1e-18 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || | || |||||||| | ||||||||||||| Sbjct 142 GAGTCGCGTTGTTTGGGAATGCAGCGCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAAT 201 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGA 134 || | ||||||||||||| ||||||| |||| Sbjct 202 ATAAGTGCGAGACCGATAGCGAACAAGTACCGTGA 236 >seq1709 Length=16563 Score = 95.1 bits (104), Expect = 5e-17 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 61 CAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCG 120 |||| | || | || |||||||| | ||||||||||||||| | ||||||| ||||| Sbjct 13928 CAGCGCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAATATAAGTGCGAGACCGGTAGCG 13987 Query 121 CACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAA 160 ||||||| |||| ||||||||||||| |||||||||| Sbjct 13988 AACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGGAAA 14027 >seq384 Length=102 Score = 91.5 bits (100), Expect = 6e-16 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 411 GTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCAAACCCG 469 |||||| |||||||||||||||||||||||| | ||| ||| |||||||| | |||||| Sbjct 1 GTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCAAGTATTTGGGTGTTGAAACCCC 60 Query 470 TGCGCGTAATGAAAGTGAACGG 491 | ||||||||||||| || || Sbjct 61 AGTGCGTAATGAAAGTAAAGGG 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079738095500