Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq571 165 1e-38 seq14 78.8 1e-12 >seq571 Length=2235 Score = 165 bits (182), Expect = 1e-38 Identities = 188/251 (75%), Gaps = 5/251 (2%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| |||||| |||||||||||||||| || ||||| || |||| | || || ||| Sbjct 2121 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 2063 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCT--- 118 | ||||||||||| ||||||||||| | || | ||| ||||| | ||| Sbjct 2062 GTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCGTGGGCTTAC 2003 Query 119 -CAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || | | |||||| || ||| | ||||||||||||||||||| ||||||||||| Sbjct 2002 GCAGTAAATGCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCC 1943 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237 | |||||| ||| ||||| | | | |||||| |||||||||||| |||||||||||| Sbjct 1942 TAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCACCTGTGTC 1883 Query 238 GGTTTACGGTA 248 ||||| |||| Sbjct 1882 GGTTTGGGGTA 1872 >seq14 Length=156 Score = 78.8 bits (86), Expect = 1e-12 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 || || | ||||||||||||||| | | ||||||||||| |||||| | | ||||| | Sbjct 32 GGTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTTCAAAATAGTTCTCT 91 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || ||||||| | || || | | ||||||||||||||| |||| Sbjct 92 TATACACCTTAGTCTATTCGACTTATCTACCTGTGTCGGTTTAAGGTA 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694317863330