Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2949 376 4e-102 seq323 248 1e-63 seq324 158 2e-36 seq331 107 3e-21 seq11458 87.8 3e-15 >seq2949 Length=378 Score = 376 bits (416), Expect = 4e-102 Identities = 234/251 (93%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 378 TAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAA 319 Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 318 CAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATC 259 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 258 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 199 Query 223 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT 282 ||||| |||||||||| ||||||| ||| || |||||||||||||||||||| |||||| Sbjct 198 TTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCAC 139 Query 283 GGTTTGTATTC 293 |||| |||||| Sbjct 138 GGTTCGTATTC 128 >seq323 Length=164 Score = 248 bits (274), Expect = 1e-63 Identities = 152/162 (94%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 66 GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCT 125 |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| Sbjct 1 GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACAATTGGCGAGTTCT 60 Query 126 GCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACG 185 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 61 ACTTCGCAATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTATGGACG 120 Query 186 CTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227 |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 162 >seq324 Length=242 Score = 158 bits (174), Expect = 2e-36 Identities = 102/112 (91%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 183 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCA 242 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | Sbjct 3 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTAA 62 Query 243 AATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||| | | ||||||||||||||||||||| |||||| |||||||||||| Sbjct 63 AATTCAAAAGAACTAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATTCA 114 >seq331 Length=515 Score = 107 bits (118), Expect = 3e-21 Identities = 61/62 (98%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 454 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 513 Query 91 TT 92 || Sbjct 514 TT 515 >seq11458 Length=110 Score = 87.8 bits (96), Expect = 3e-15 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 54 TGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCA 109 ||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 TGTCTCACGAACGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854295677760