Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq571 331 3e-88 seq18 93.3 2e-16 >seq571 Length=2235 Score = 331 bits (366), Expect = 3e-88 Identities = 413/557 (74%), Gaps = 18/557 (3%) Strand=Plus/Minus Query 45 CACTTCCCGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCAT 103 ||||| || |||||||||||| | || |||||| | | | |||||||| | | Sbjct 1198 CACTTGTAGGTATTCGGAGTTTGCATCGGTTTGGTAAGTCGGGATGACCCCCTAGCCGAA 1139 Query 104 CCAGTGCTCTACCTCCGGGAA-GAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAG 162 |||||||||||| || | || ||| | | |||| |||||||| ||||| |||| Sbjct 1138 ACAGTGCTCTACCCCCTACAGTGATACATGAGGCGCT--ACCTAAATAGCTTTCGAGGAG 1081 Query 163 AACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGT 222 ||||||||||| | || |||||| ||||||||| || ||||||||||||||| || | | Sbjct 1080 AACCAGCTATCTCCGAGCTTGATTAGCCTTTCACTCCGATCCACAGGTCATCCGCTAACT 1021 Query 223 TTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATG 282 ||||||| ||| |||||||||||||| || |||||| |||||||||||||||| Sbjct 1020 TTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTGTTACCCAACCTTCAACCTGCCCATG 961 Query 283 GATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCT 342 |||||||| | | ||||||||| | || ||| | |||||||||| |||||||| Sbjct 960 GATAGATCGCCCGGTTTCGGGTCTATTCCCAGCGACT-AGACGCCCTATTAAGACTCGCT 902 Query 343 TTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCAT 402 ||||||||| || ||| | | |||||| ||||| || || || |||| | | ||| Sbjct 901 TTCGCTACGCCTCCCCTATTC-GGTTAAGCTCGCCACTGAA-AATAAGTCGCTGACCCAT 844 Query 403 TCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTA 462 | | ||||||| |||| |||||| | |||| | ||||| || | ||||| Sbjct 843 TATACAAAAGGTACGCAGTCACC-----CAACAAAG-----TGGGCTCCCACTGCTTGTA 794 Query 463 GGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTC 521 ||| | ||||||||| |||||||||||| | | | | ||| |||||| |||||||||| Sbjct 793 CGCATACGGTTTCAGGATCTATTTCACTCCGCTCTCCGCGGTTCTTTTCGCCTTTCCCTC 734 Query 522 ACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCA 581 |||||||| || | |||||||||| || ||||||||| ||| || ||||||| ||| Sbjct 733 ACGGTACTGGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 674 Query 582 GATTCACACGAAATTTC 598 ||||| || | |||| Sbjct 673 TATTCAGACAAGGTTTC 657 >seq18 Length=320 Score = 93.3 bits (102), Expect = 2e-16 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||||| ||| ||||||||||| | ||||||||| ||||||||| |||| ||||| || Sbjct 144 ATTTCGCGGAAAACCAGCTATCTCCGAGTTTGATTAGCCTTTCACTCCTAACCACAAATC 203 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCA 271 ||| | | ||| | || || ||| ||||| || | || || ||| || |||| Sbjct 204 ATCTCTATATTTTGCCACATATGTGAGTTCGATCTTTCAAATAGTTTTATCCATTTTTCA 263 Query 272 ACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTT 307 | ||| ||| | |||||||| | |||||||||| Sbjct 264 ATCTGTTCATAGTTAGATCACCCGGTTTCGGGTCTT 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817378071040