Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 1e-16 seq6099 75.2 9e-12 >seq36 Length=550 Score = 91.5 bits (100), Expect = 1e-16 Identities = 120/164 (73%), Gaps = 7/164 (4%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCG--- 58 |||||| ||| ||| |||||| |||| |||| ||||| |||| ||||| | Sbjct 414 CGAGTTTCAGCCTATAATCCGAACTAAGATA-ACTTTTAAAGATTTGCTCCAATTTTAAA 356 Query 59 --CGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGG 116 | | ||| | | |||| |||||||||| ||||||| ||||| || ||||||| Sbjct 355 ACCATTATTGCGTCTCATTGTAATTACCATTGTAGCACGTGTGTAGCCCAACTCATAAGG 296 Query 117 GCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160 ||||||| |||||||| ||||||||| |||||| | ||| ||| Sbjct 295 GCCATGAAGACTTGACCTCATCCCCA-CTTCCTTCAATTTATCA 253 >seq6099 Length=1057 Score = 75.2 bits (82), Expect = 9e-12 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 93 ACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||||||| ||||| || |||||||||||||| |||||||| ||||||||| |||||| | Sbjct 924 ACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACCTCATCCCCA-CTTCCTTCA 866 Query 153 GTTTGTCA 160 ||| ||| Sbjct 865 ATTTATCA 858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415950793700