Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq144 145 2e-32 >seq144 Length=258 Score = 145 bits (160), Expect = 2e-32 Identities = 164/214 (77%), Gaps = 7/214 (3%) Strand=Plus/Minus Query 230 GATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGA--GGCAGCAGTGGGG 287 |||| |||||||||| ||||||| |||| ||||||| || | |||||||||| || Sbjct 218 GATCAGCCACATTGGGACTGAGAAACGGCCCAAACTTTTAAAAAAAAGGCAGCAGTGAGG 159 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGT-GAGCGATGAAGGC-CT 345 ||| ||| |||||| || ||||| |||| |||||| || || ||| || |||||| Sbjct 158 AATTTTGGACAATGAGCGAAAGCTTGATCCAGCAATACCAAGTGGAGTGAAGAAGGCTAA 99 Query 346 TCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCG 405 ||| ||||| |||| || | ||||| || |||||| |||||| | || |||| | | Sbjct 98 ATAGGTTGTAAAACTCTTTCGTTAAGGAGGAAAATGACAGTACTTAAAGAAGAAGTTCTG 39 Query 406 GCTAACTA--CGTGCCAGCAGCCGCGGTAATACG 437 ||||| || ||||||||||| |||||||||||| Sbjct 38 GCTAA-TACCCGTGCCAGCAGTCGCGGTAATACG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497417143040