Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq10975 408 1e-111 seq155 316 7e-84 seq424 255 2e-65 seq4073 192 2e-46 seq324 122 3e-25 seq2949 120 1e-24 >seq10975 Length=333 Score = 408 bits (452), Expect = 1e-111 Identities = 297/337 (88%), Gaps = 8/337 (2%) Strand=Plus/Plus Query 102 CCTGACAATGTCATCAACCCGGATCGGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGG 158 |||||||||||| || ||||||||| ||||| |||| || ||| | | || | || Sbjct 1 CCTGACAATGTCCTCCGCCCGGATCGACCCGCCGAAGCGAGTCTTGGATCTAAAAGAAGG 60 Query 159 TCGGTGAAGACCAG-TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTAT 217 | || || | ||||| |||| || ||||||||| |||| ||| |||||||||| Sbjct 61 G-GTTGTTACCCCGCTTCCGGTTCACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTAT 119 Query 218 TTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC 277 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TTCACTTGCGCCGGA---GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC 176 Query 278 GGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCC 337 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 177 GGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCC 236 Query 338 TTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 237 TTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCAT 296 Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434 ||||||||||||||||||||||||||||||||||||| Sbjct 297 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 333 >seq155 Length=319 Score = 316 bits (350), Expect = 7e-84 Identities = 225/256 (88%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCT 238 ||||| | ||||||| | || ||| |||||||||||||||| || | || | || Sbjct 67 TTCATGGTATAAGTAAGACGACATTAAAAGTAGTGGTATTTCACTGTCGGCAAAGC--CT 124 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| ||||||||| ||||||| |||||| ||| |||||||||||||||||||| Sbjct 125 CCCACTTATACTACACCTCCTAAGTCATCTCACAACGTCAGACTAGAGTCAAGCTCAACA 184 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 185 GGGTCTTCTT-CCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGAC 243 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 244 AGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGATGAC 303 Query 419 GAGGCATTTGGCTACC 434 |||||||||||||||| Sbjct 304 GAGGCATTTGGCTACC 319 >seq424 Length=365 Score = 255 bits (282), Expect = 2e-65 Identities = 146/149 (98%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 444 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 TTAATCCATTCATGCGCGTCACTAGTTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 60 Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 61 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATCTCTTCACTTTGACATTCAGAG 120 Query 505 CACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||| ||||||| Sbjct 121 CACTGGGCAGAAATCACATTGTGTCAACA 149 >seq4073 Length=85442 Score = 192 bits (212), Expect = 2e-46 Identities = 115/121 (95%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 52544 TGACGAGGCATTTGGCTACCTTAAGAGAGACATAGTTACTCCCGTCGTTTACCCGCGCTT 52485 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 |||||||| |||||| ||||||||||| | |||||||||||||||||||||||||||||| Sbjct 52484 GGTTGAATCTCTTCATTTTGACATTCAAATCACTGGGCAGAAATCACATTGCGTCAACAT 52425 Query 535 C 535 | Sbjct 52424 C 52424 >seq324 Length=242 Score = 122 bits (134), Expect = 3e-25 Identities = 84/95 (88%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||| || Sbjct 148 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTCTG 207 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 101 | |||||||||||||||||||||||||||||||| Sbjct 208 TTCTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 242 >seq2949 Length=378 Score = 120 bits (132), Expect = 1e-24 Identities = 83/94 (88%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 94 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 35 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 ||||||||||||||||||||||||||||||||| Sbjct 34 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635000342080