Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06]
12,210 sequences; 33,823,601 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq533 468 2e-129
seq3569 358 2e-96
seq7978 208 2e-51
seq352 77.0 1e-11
>seq533
Length=565
Score = 468 bits (518), Expect = 2e-129
Identities = 408/499 (82%), Gaps = 20/499 (4%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59
|| |||||||||||| | ||| | || ||||| | || |||||||||||||||||
Sbjct 75 GTTCTCATTCCAATTGCCCGACTCGAA-GAGCCAGAGCATTGTTATTTATTGTCACTACC 133
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 134 TCCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 193
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||||
Sbjct 194 TTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAATGCCATGGC 253
Query 180 AGGCCACTATCCTACCAT-CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238
||||| ||||||||||| | |||| |||||||||||||| | | || |||||
Sbjct 254 AGGCCGATATCCTACCATCCCAAAGCTGATAGGGCAGAAACTCAATCGATTTATCGC--A 311
Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA----AGGAGCCCCGAAG-GG 293
| ||| |||||| || ||||||||||| ||| || | ||||| ||| |
Sbjct 312 CAAAAG----TGCGATCCGCACAGTTATTATGATTCAACACAATACCAGCCCGAAAGCTG 367
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCATG 348
| |||| ||| ||||||||||| | ||| |||| ||| ||| || | |||||
Sbjct 368 CATTGG-TTTCAATCTAATAAATGCTACCCGCCCGACAAGCAGTTGGGTATTGTTGCATG 426
Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408
|||||||||||||||||| |||| |||||| |||||||||||||||| | || || ||||
Sbjct 427 TATTAGCTCTAGAATTACTACGGGTATCCAAGTAGTAAGGTACTATCGAGTAGACTATAA 486
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468
||||| ||||||||||||||||||||||| ||| | |||| |||||||||||||||||||
Sbjct 487 CTGATATAATGAGCCATTCGCAGTTTCACAGTACAAATTGTTTATACTTAGACATGCATG 546
Query 469 GCTTAATCTTTGAGACAAG 487
|||||||||||||||||||
Sbjct 547 GCTTAATCTTTGAGACAAG 565
>seq3569
Length=309
Score = 358 bits (396), Expect = 2e-96
Identities = 267/308 (87%), Gaps = 10/308 (3%)
Strand=Plus/Minus
Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 250
Query 146 ACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTT 205
|||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 249 ACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAGTT 190
Query 206 GATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTTAAGTT 264
|||||||||||||||||||||| | ||||| || | ||||||||||||| ||| ||||
Sbjct 189 GATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACTAAGGCCATGCGATCCGTCGAGTT 130
Query 265 ATTATGAATCACCAAGGAGC--CCCGAAG----GGCGTTGGTTTTTTATCTAATAAATAC 318
|| |||||||| || |||| | | || |||| | ||||||||||||||| |
Sbjct 129 ATCATGAATCATCA--GAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATGC 72
Query 319 ACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCC 377
| ||||||| ||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct 71 ATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCC 12
Query 378 ATGTAGTA 385
||||||
Sbjct 11 GAGTAGTA 4
>seq7978
Length=167
Score = 208 bits (230), Expect = 2e-51
Identities = 145/162 (90%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403
||| ||||||||||||||||||| |||||||||| |||||| | ||| |||||| ||||
Sbjct 166 GCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTA-GTTACCATCAAACAAAC 108
Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACA 462
||||||||||||||||||||||||||||||||| || | ||| || ||||||| |||
Sbjct 107 TATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACA 48
Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||
Sbjct 47 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 6
>seq352
Length=449
Score = 77.0 bits (84), Expect = 1e-11
Identities = 44/45 (98%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1 ACATGCATGGCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 45
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510215580160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |