Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq533 468 2e-129 seq3569 358 2e-96 seq7978 208 2e-51 seq352 77.0 1e-11 >seq533 Length=565 Score = 468 bits (518), Expect = 2e-129 Identities = 408/499 (82%), Gaps = 20/499 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59 || |||||||||||| | ||| | || ||||| | || ||||||||||||||||| Sbjct 75 GTTCTCATTCCAATTGCCCGACTCGAA-GAGCCAGAGCATTGTTATTTATTGTCACTACC 133 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 134 TCCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 193 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| ||||||||||||||||||| |||||||||||||||||||||||| || |||||| Sbjct 194 TTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAATGCCATGGC 253 Query 180 AGGCCACTATCCTACCAT-CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||||| ||||||||||| | |||| |||||||||||||| | | || ||||| Sbjct 254 AGGCCGATATCCTACCATCCCAAAGCTGATAGGGCAGAAACTCAATCGATTTATCGC--A 311 Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA----AGGAGCCCCGAAG-GG 293 | ||| |||||| || ||||||||||| ||| || | ||||| ||| | Sbjct 312 CAAAAG----TGCGATCCGCACAGTTATTATGATTCAACACAATACCAGCCCGAAAGCTG 367 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCATG 348 | |||| ||| ||||||||||| | ||| |||| ||| ||| || | ||||| Sbjct 368 CATTGG-TTTCAATCTAATAAATGCTACCCGCCCGACAAGCAGTTGGGTATTGTTGCATG 426 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 |||||||||||||||||| |||| |||||| |||||||||||||||| | || || |||| Sbjct 427 TATTAGCTCTAGAATTACTACGGGTATCCAAGTAGTAAGGTACTATCGAGTAGACTATAA 486 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||||| ||||||||||||||||||||||| ||| | |||| ||||||||||||||||||| Sbjct 487 CTGATATAATGAGCCATTCGCAGTTTCACAGTACAAATTGTTTATACTTAGACATGCATG 546 Query 469 GCTTAATCTTTGAGACAAG 487 ||||||||||||||||||| Sbjct 547 GCTTAATCTTTGAGACAAG 565 >seq3569 Length=309 Score = 358 bits (396), Expect = 2e-96 Identities = 267/308 (87%), Gaps = 10/308 (3%) Strand=Plus/Minus Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 309 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 250 Query 146 ACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTT 205 |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 249 ACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAGTT 190 Query 206 GATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTTAAGTT 264 |||||||||||||||||||||| | ||||| || | ||||||||||||| ||| |||| Sbjct 189 GATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACTAAGGCCATGCGATCCGTCGAGTT 130 Query 265 ATTATGAATCACCAAGGAGC--CCCGAAG----GGCGTTGGTTTTTTATCTAATAAATAC 318 || |||||||| || |||| | | || |||| | ||||||||||||||| | Sbjct 129 ATCATGAATCATCA--GAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATGC 72 Query 319 ACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCC 377 | ||||||| ||||||||||||| | ||| ||||||||||||||||||| |||||||||| Sbjct 71 ATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCC 12 Query 378 ATGTAGTA 385 |||||| Sbjct 11 GAGTAGTA 4 >seq7978 Length=167 Score = 208 bits (230), Expect = 2e-51 Identities = 145/162 (90%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403 ||| ||||||||||||||||||| |||||||||| |||||| | ||| |||||| |||| Sbjct 166 GCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTA-GTTACCATCAAACAAAC 108 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACA 462 ||||||||||||||||||||||||||||||||| || | ||| || ||||||| ||| Sbjct 107 TATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACA 48 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||| Sbjct 47 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 6 >seq352 Length=449 Score = 77.0 bits (84), Expect = 1e-11 Identities = 44/45 (98%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1 ACATGCATGGCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510215580160