Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000326065.1_202012-11-06] 12,210 sequences; 33,823,601 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq500 134 1e-26 seq835 116 3e-21 >seq500 Length=28399 Score = 134 bits (148), Expect = 1e-26 Identities = 960/1513 (63%), Gaps = 63/1513 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||| ||||| |||| || | || | ||||||||||| || || Sbjct 22519 ATCGACTGTGAATTGGATTGCATCTGCTCTTGGACGTGTTCGGAGATAGTACATTCCTGT 22578 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195 ||||| || ||| || |||||||||||||| | | | ||| | | | |||| | Sbjct 22579 TTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAAG-TGAGTTTACTGACAGTCGGGT 22637 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 |||| | || ||||| | || ||||||||| ||||| || ||||| ||||||| Sbjct 22638 CGGCAATGTGAATATTAAGTGATTGACTCTGACAAATGTACGCTCCTCGATCGGCAGCCA 22697 Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 |||| | || || | | | || ||||| || || |||||| || | | Sbjct 22698 TGTCCAAAAT-CGCCTTTTGCTTGATTTCCCAAACTGTTTTGTACTTTTCTTTCACATGA 22756 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGA-CGTGCAATAATGCGATTACGCAT 65373 ||||| || | || | || || ||||| ||| || | || || |||| || | Sbjct 22757 GGCGGAATTTCAGCGATATTTTGTACGGAACCGCGATCGCG-AAGGATTTGATTCCGAA- 22814 Query 65374 CGACTC-TGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC-- 65430 || || || ||||||| || || ||||| | || ||| | || ||| |||| Sbjct 22815 CGTCTGATGTCCACAAATTCATCTCAATAAGCTCTT---CCATGAGATATTTGTTGACAA 22871 Query 65431 TTGGAACT-CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 ||| || | | || | || || || || | |||||||| |||| || || | | Sbjct 22872 TTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGTTGGAAGTGAACGGCTCGATAG 22931 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 | || ||||| |||||||| || || || || |||||||| ||||||| || ||| | Sbjct 22932 ACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTGGCATCGGAGCGAGCAGCAAAG 22991 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC--ATCGG 65607 ||||||| | ||||| | | | | | ||| | | ||| | ||| | ||| Sbjct 22992 AGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACTGCTTCCAATCCCATCGACCGG 23051 Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667 |||| || || || |||||||||| ||| | | | || ||| | ||||| Sbjct 23052 A--ATCGG-GA-ATG-ACCTGCCACATATCAAATTGAAAGATACCTCGACTAACTGGTGA 23106 Query 65668 ACCGAGGAAA-CTATCGTACACTCCCTCCTCCT-TGGCAAGT---TGACAGCTGGTCTCG 65722 || || | | || |||||| ||| ||| || ||| | || |||| || Sbjct 23107 TCC-AGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCATGGAAGCT----TCC 23161 Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC 65782 | || || ||||| || || || ||||| | || || || || || | | ||| Sbjct 23162 ATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAGCAGCTTTGCTT 23221 Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842 || | || | || |||||| | ||| || ||||| ||||||||||| || || || || Sbjct 23222 TCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGCCGATTCCAATC 23281 Query 65843 GGACGATGACGCAAATTGGA-ACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 || ||||| ||| |||| || | | || ||||| | || || ||||||| ||| || Sbjct 23282 GGTCGATGTCGCTGATTGCTCACTTGT-GCTTCAGGAATCGGATAATAATTGAGATCAAT 23340 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAA 65960 || || | ||| || || | | ||| ||| |||| | | || | || Sbjct 23341 GATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTAT-AATTTTGCAAACTGAA 23399 Query 65961 AATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGA 66020 | | ||| | || || ||||| || | | || | || || | Sbjct 23400 ATTCTTT-----------------CTGATAC-ACAAATTTTGACAATGCGATGGAAGCCA 23441 Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAG-CGGTATACTCGACAATTTCGGTGCACAGATTA 66079 ||||| || || | || | |||| | | ||||||| ||||| ||| ||||| Sbjct 23442 AATTGCATACTGCCACTTCTTT-GGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTG 23500 Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 || | || ||||| || | |||||| ||||| || ||||| || || || ||||| Sbjct 23501 CTTGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAA 23560 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC-G 66198 | ||| ||||| || |||||||||| || || | ||||| ||| | | || | Sbjct 23561 AGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA-ATTGCTG 23619 Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGA 66257 || || || || | | | | | |||| | ||||| | ||| || | || | Sbjct 23620 GGCTTTGACAGT-CTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATCAA 23678 Query 66258 AG--GATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 | | ||| ||||| || | || | |||| || || ||||| | | ||| Sbjct 23679 ATTCGCTTC--CCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCA 23736 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 || | | ||| ||||| |||||| ||||| || ||||| || || || || | Sbjct 23737 TTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAA 23796 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 ||| || ||||| || ||| | || ||||| || || | || || ||||||||||| Sbjct 23797 ATCTCGAGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGAT 23856 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 || |||||||| || || || || || || || || || | || || || |||||||| Sbjct 23857 ATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTG 23916 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 || ||||| ||||| | ||||| || || | ||| || || | || || || | Sbjct 23917 ATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACT 23976 Query 66556 GCCATTGGTGCCG 66568 ||||| || ||| Sbjct 23977 TCCATTCGTCCCG 23989 >seq835 Length=76541 Score = 116 bits (128), Expect = 3e-21 Identities = 367/563 (65%), Gaps = 18/563 (3%) Strand=Plus/Minus Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143 || |||||| |||||| || || || || || ||| ||||| | || || ||||| Sbjct 30347 GAGATTTGGGACATGTATAAGAAAGCAGAGGCAAGCTTTTGGACCGCAGAAGAAATCGAT 30288 Query 61144 TTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||| | ||||||||||||||| | ||||| | |||| ||| || || ||| Sbjct 30287 TTGGTGCATGACATGAATGACTGGCTTAATATATCGGACAATGAAAGACACTTTATCAAA 30228 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTT----ATTGGA 61259 || |||||||| |||||||| || || || || |||||||| ||| | || || Sbjct 30227 CACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATTGTCAATGAAAATCTCGCCAT--GA 30170 Query 61260 ACGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318 | |||| |||| ||||| || | | || || || || || ||||| || || |||| Sbjct 30169 A--TTTC-AGCAGTGAGGTTCAGATCCCCGAAGCTCGATGCTTTTACGGATTTCAAATTG 30113 Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 | || || ||| | |||||||| |||| | | || ||||| ||||||| || | Sbjct 30112 CAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATC 30053 Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438 | ||| | | || | || || || || || ||| || | |||| Sbjct 30052 CAACTGAAAAACAGCATTTACTGTGCGCGATTGAAACAATCCCGTGCGTTACCAATAAAG 29993 Query 61439 CGGATTGGGCCTTCAATTG----GATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494 | | ||||| || || || |||| |||| || | |||| ||| || || Sbjct 29992 CACAATGGGCGTTGAAATGGTGCGATCCAAAGTA----TGCCTCGTTTGCAGAAAGAGTG 29937 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || ||||||| ||||| || | |||||| ||||| || | | || |||||| Sbjct 29936 GTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATATTTTGG 29877 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614 |||||||||| ||| | ||||| || || ||| |||||| | || || || Sbjct 29876 CTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTCGTGAT 29817 Query 61615 GAGGGCATGCATTGTGATTTTGC 61637 || || | |||||||| ||||| Sbjct 29816 GAAGGACTACATTGTGACTTTGC 29794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397508838154400