Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq13 268 1e-69 seq1500 75.2 2e-11 >seq13 Length=2158 Score = 268 bits (296), Expect = 1e-69 Identities = 199/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| || |||||||||||| | Sbjct 1030 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCATTTACTAGGAATT-C 973 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| |||| | |||||||| ||||||||| | ||||||| |||| |||||| Sbjct 972 CTCGTTCAAGATTGAAAATTGCAACAATCTATCCCTAGCACGATGCGCATTTACAAGATT 913 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 912 ACCCAGACCTATCGGTCAAGGTTTTAAACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 853 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 852 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 804 >seq1500 Length=35815 Score = 75.2 bits (82), Expect = 2e-11 Identities = 77/101 (76%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 || |||||| || ||| |||||| ||| |||| | |||||||||||||||||||||| Sbjct 28945 GGTCAAGGTATTAAACTTGTTGAACGCATGAGTGCAATGCGCGTGCGGCCCAGAACATCT 28886 Query 193 AAGG------GCATCACAGACCTGTTATTGCCTCAAACTTC 227 |||| ||||||||| | |||||||| |||||| Sbjct 28885 AAGGTTATATATATCACAGACGTAATATTGCCTACAACTTC 28845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751957863560