Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq13 221 2e-55 seq2460 93.3 8e-17 >seq13 Length=2158 Score = 221 bits (244), Expect = 2e-55 Identities = 201/249 (81%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCAT 130 |||||| |||||||||||||||||| ||||||||| ||||||| |||||| | ||||| Sbjct 131 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACTTCAGCAT 190 Query 131 GGAATAATAGAATAGGACGTGCG-GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||| ||| | | | |||||||||||||||| | ||| ||||||| Sbjct 191 GGAATAATAAGATACGACCTTGGTGGTCTATTTTGTTGGTTTGCAC-ACCAGGGTAATGA 249 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||| ||| |||||| | |||| | |||||||||||||||||||||| Sbjct 250 TTAATAGGGACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGATCGT 309 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | |||| | || |||||||| || ||||||||||||||||||||||| ||||||| Sbjct 310 TGAAAGATGAGCTTAGGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAA 368 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 369 AGTTAGGGG 377 >seq2460 Length=2997 Score = 93.3 bits (102), Expect = 8e-17 Identities = 91/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 || ||| |||||| | |||| | |||||||||||||||||||||| | |||| Sbjct 1743 GACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGATCGTTGAAAGAT 1684 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 | || |||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct 1683 GAGCTTAGGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 1629 Score = 80.6 bits (88), Expect = 5e-13 Identities = 73/91 (80%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||||| | | | ||||||||||||||||| ||| |||||| | Sbjct 1383 TCTATTTTGTTGGTTTGCACTCCAGG-GTAATGATTAATAGGGACAGTTGGGGGTATTCA 1441 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 |||| | |||||||||||||||||||||| Sbjct 1442 TATTTCAACGTCAGAGGTGAAATTCTTGGAT 1472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915147064832