Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq21 302 1e-79 >seq21 Length=1082 Score = 302 bits (334), Expect = 1e-79 Identities = 372/503 (74%), Gaps = 34/503 (7%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||| Sbjct 525 TACGATCGCAAGGTTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCAT 584 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||| ||||||||||||| |||||| | | ||| | Sbjct 585 GTGGTTTAATTCGATAATACGCGCAGAACCTTACCAACTCTTGAAAA--TTTGA----TT 638 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | | ||| || || | | ||||||| ||||||| ||||||||| Sbjct 639 AAAAAATAA----TT----TTAGTTTAA-------ACAGGTGTTGCATGGCTGTCGTCAG 683 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||| |||| ||||| |||||| ||| |||| |||||||| || |||||||| Sbjct 684 TCCGTGTTGTGAAATGTTTGGTTAATTCCTTTAACGGACGCAACCCCTATTATTAGTTGC 743 Query 241 CA---TCATTAAGTTGG----GCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGG 293 || | |||| | ||||||||| |||| | ||| ||| | |||||| Sbjct 744 CACTTTATTTAAAATATAAAAGCACTCTAATAAAACTGTCAATGATAAATTGAAGGAAG- 802 Query 294 TGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG 353 |||||| || ||||| || ||||| ||||||||| ||||||||||||||||||||||||| Sbjct 803 TGGGGATGAGGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATGG 862 Query 354 ACAATACAAAGGGCAGCGAAACCG----CGAGGTCAAGCAAATCCCATAAAGTTGTTCTC 409 | ||||| | | || | | | | | |||||||| |||||| ||| Sbjct 863 TAATTACAATGAGACGCAATAATGTTTTTAAATTGGAGCAAATCTTTAAAAGTT-ATCTT 921 Query 410 AGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGAT 469 |||||||||| ||| ||| |||||| ||||||||||||||||||||||||||||| ||| Sbjct 922 AGTTCGGATTATAGGCTGAAACTCGCCTATATGAAGCTGGAATCGCTAGTAATCGCAGAA 981 Query 470 CAGCATGCTACGGTGAATACGTT 492 ||||||||| ||||||||| ||| Sbjct 982 CAGCATGCTGCGGTGAATATGTT 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503913008640