Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq93 111 3e-22 seq3347 77.0 7e-12 seq21 77.0 7e-12 >seq93 Length=746 Score = 111 bits (122), Expect = 3e-22 Identities = 128/170 (75%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 43 TGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGT-AGGAGTCTG 101 ||||||| |||||||| |||||||||| ||||| ||||||||||| | | ||| || Sbjct 746 TGGATCAAGCTTTCGCTCATTGTCCAAAATTCCTCACTGCTGCCTTTTTTAAAAAGTTTG 687 Query 102 GACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCC 161 | |||| ||||||| ||| |||| |||||| | || ||| ||||| || ||| | | | Sbjct 686 GGCCGTTTCTCAGTCCCAATGTGGCTGATCGTTCTTTCAAACCAGCTAAAGATTGCAGGC 627 Query 162 TTGGTGAG-CCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATCT 210 ||||| || | |||| |||||||| |||||| || | ||||||| Sbjct 626 TTGGTAAGTCTATTAAACTACCAACTACCTAATCTTACGCAAACTCATCT 577 >seq3347 Length=16847 Score = 77.0 bits (84), Expect = 7e-12 Identities = 77/99 (78%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 43 TGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGT--AGGAGTCT 100 ||||||| |||||||| |||||||||| ||||| ||||||||||| | | ||| | Sbjct 16847 TGGATCAAGCTTTCGCTCATTGTCCAAAATTCCTCACTGCTGCCTTTTTTTAAAAAGTTT 16788 Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTC 139 || ||| ||||||| ||| |||| |||||| | || || Sbjct 16787 GGGCCGGTTCTCAGTCCCAATGTGGCTGATCGTTCTTTC 16749 >seq21 Length=1082 Score = 77.0 bits (84), Expect = 7e-12 Identities = 61/71 (86%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| ||| || |||| |||||||| |||||||| |||||||||| ||||| Sbjct 71 CCTTCTT-CACTCACTTGGTATTG-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCT 14 Query 77 CACTGCTGCCT 87 ||||||||||| Sbjct 13 CACTGCTGCCT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071937995520