Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq79 141 1e-31 >seq79 Length=696 Score = 141 bits (156), Expect = 1e-31 Identities = 190/263 (72%), Gaps = 5/263 (2%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76 |||| |||| ||||| |||||| | ||| |||||| | | ||||||| | | Sbjct 36 CTTATATGCTTTCAGTAATTATCCTATATAAATTTAGCTACTCGGCTATGCTTTAAAAAA 95 Query 77 T----ACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCT 132 ||||| | | |||||||| ||| || | || ||||||||||||| || | Sbjct 96 ATTAAACAACCGATACACCAGAGATTTACCCTTTTCGATCCTCTCGTACTAGAATTAGAT 155 Query 133 CCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAA 192 | ||| |||| | || | ||||| ||| ||||||||| ||||||||| || Sbjct 156 TTTTTCATTTTTCGTTTTTTGTAGAAG-ATAGGAACCAAACTGTCTCACGACGTTCTAAA 214 Query 193 CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCC 252 |||| ||| ||| || ||||||| ||||||||||| ||||||||| |||| ||||||| | Sbjct 215 CCCAACTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGAACCTTCTTCAGCTC 274 Query 253 CAGGATGAGACGAGCCGACATCG 275 ||||||| || ||| |||||||| Sbjct 275 CAGGATGTGATGAGTCGACATCG 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780756249824