Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000961115.1_202015-03-24] 5,784 sequences; 32,721,549 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq51 468 2e-129 seq217 192 2e-46 seq132 123 8e-26 >seq51 Length=1061 Score = 468 bits (518), Expect = 2e-129 Identities = 282/297 (95%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| ||||||||| ||||||| |||||| ||| |||||||||||||||||| Sbjct 1047 CTCCCACTTATACTACACCTCCTAAGTCATCTCACAACGTCAGACTAGAGTCAAGCTCAA 988 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 987 CAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAG 928 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 927 ACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGATG 868 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 867 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 808 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 807 TTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 751 >seq217 Length=24310 Score = 192 bits (212), Expect = 2e-46 Identities = 115/121 (95%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 20666 TGACGAGGCATTTGGCTACCTTAAGAGAGACATAGTTACTCCCGTCGTTTACCCGCGCTT 20607 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 |||||||| |||||| ||||||||||| | |||||||||||||||||||||||||||||| Sbjct 20606 GGTTGAATCTCTTCATTTTGACATTCAAATCACTGGGCAGAAATCACATTGCGTCAACAT 20547 Query 535 C 535 | Sbjct 20546 C 20546 >seq132 Length=923 Score = 123 bits (136), Expect = 8e-26 Identities = 85/96 (89%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||| || Sbjct 96 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTCTG 37 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 | ||||||||||||||||||||||||||||||||| Sbjct 36 TTCTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635105420032